RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 SFTPBP07988 381 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 VAMP1P23763 118 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 PSMB6P28072 239 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 CLDN18P56856 261 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 CARD18P57730 90 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 ARPC4P59998 168 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 GMFBP60983 142 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 RAB14P61106 215 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 SLC9A3R2Q15599 337 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 CDCP2Q5VXM1 449 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 PXT1Q8NFP0 134 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 ZNF703Q9H7S9 590 aaPredicted RBP13.33□□□□□ -0.28
CPSF7-202ENST00000394888 RAB18Q9NP72 206 aa13.33□□□□□ -0.28
CPSF7-202ENST00000394888 SERPINE3A8MV23 424 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 EEF1E1-BLOC1S5C9J1V9 151 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 HTR3BO95264 441 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 OTX2P32243 289 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 RRADP55042 308 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 PIGYQ3MUY2 71 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 RIPPLY2Q5TAB7 128 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 ESX1Q8N693 406 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 ZBTB44Q8NCP5 570 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 PHYHIPLQ96FC7 376 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 NBEAQ8NFP9 2946 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 CD79AP11912 226 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 SRSF3P84103 164 aaKnown RBP13.32□□□□□ -0.28
CPSF7-202ENST00000394888 SSPNQ14714 243 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 CALHM1Q8IU99 346 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 SLC30A7Q8NEW0 376 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 OR52H1Q8NGJ2 320 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 OR2V1Q8NHB1 315 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 FAAP24Q9BTP7 215 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 P4HTMQ9NXG6 502 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 ZDBF2Q9HCK1 2354 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 SHANK1Q9Y566 2161 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 ZNF205O95201 554 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 TCN2P20062 427 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 DUSP3P51452 185 aaPredicted RBP13.32□□□□□ -0.28
CPSF7-202ENST00000394888 C5orf24Q7Z6I8 188 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 Q8NFD4 153 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 SEMA6DQ8NFY4 1073 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 OR10AD1Q8NGE0 317 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 TMEM45BQ96B21 275 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 C1QTNF5Q9BXJ0 243 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 CHMP1AQ9HD42 196 aaPredicted RBP13.32□□□□□ -0.28
CPSF7-202ENST00000394888 HSF4Q9ULV5 492 aa13.32□□□□□ -0.28
CPSF7-202ENST00000394888 LNP1A1A4G5 178 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 GPER1Q99527 375 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 TAS2R31P59538 309 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 CEACAM16Q2WEN9 425 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 PDSS1Q5T2R2 415 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 PDZD9Q8IXQ8 264 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 FOXB1Q99853 325 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 SLC5A7Q9GZV3 580 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 SERPINA7P05543 415 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 CBX5P45973 191 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 PLA2G2CQ5R387 149 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 DHRS11Q6UWP2 260 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 GALNTL5Q7Z4T8 443 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 OR5H2Q8NGV7 314 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 OR14L1PQ8NHC6 308 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 AQP10Q96PS8 301 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 URM1Q9BTM9 101 aaKnown RBP13.31□□□□□ -0.28
CPSF7-202ENST00000394888 PRRG4Q9BZD6 226 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 IL36GQ9NZH8 169 aa13.31□□□□□ -0.28
CPSF7-202ENST00000394888 CDX4O14627 284 aaPredicted RBP13.3□□□□□ -0.28
CPSF7-202ENST00000394888 FCGR3AP08637 254 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 ZNF883P0CG24 379 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 NR2C1P13056 603 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 RBM39Q14498 530 aaKnown RBP13.3□□□□□ -0.28
CPSF7-202ENST00000394888 STK11Q15831 433 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 DCAF12Q5T6F0 453 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 TSPO2Q5TGU0 170 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 BRICD5Q6PL45 260 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 C6orf15Q6UXA7 325 aaPredicted RBP13.3□□□□□ -0.28
CPSF7-202ENST00000394888 UNQ6126/PRO20091Q6UXV3 157 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 EHFQ9NZC4 300 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 PADI1Q9ULC6 663 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 CRYM-AS1A6NIL9 109 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 CD59P13987 128 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 AMY2BP19961 511 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 CNR1P21554 472 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 SPSB1Q96BD6 273 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 DNTTIP1Q9H147 329 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 ZDHHC8Q9ULC8 765 aa13.3□□□□□ -0.28
CPSF7-202ENST00000394888 PRRC2CQ9Y520 2896 aaKnown RBP13.3□□□□□ -0.28
CPSF7-202ENST00000394888 GEMIN2O14893 280 aaKnown RBP13.29□□□□□ -0.28
CPSF7-202ENST00000394888 ACTL6AO96019 429 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 PXDC1Q5TGL8 231 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 SPTSSAQ969W0 71 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 NECAB3Q96P71 396 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-202ENST00000394888 DNASE2O00115 360 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-202ENST00000394888 IGHEP01854 428 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 ZNF708P17019 499 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 CPT2P23786 658 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 GABRR1P24046 479 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 NUP62P37198 522 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-202ENST00000394888 CCDC54Q8NEL0 328 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 OR4A4PQ8NGN8 299 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 DDA1Q9BW61 102 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms