RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 NDUFS8O00217 210 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 SAP30O75446 220 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 NBEAP1P0C6P0 100 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 VIPR2P41587 438 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 CNN1P51911 297 aaKnown RBP11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 BIDP55957 195 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 FHL1Q13642 323 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 GGTLC2Q14390 218 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 ALG10BQ5I7T1 473 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 METRNLQ641Q3 311 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 MFSD9Q8NBP5 474 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 OR14C36Q8NHC7 312 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 FNDC9Q8TBE3 224 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 MOB3AQ96BX8 217 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 GTF3C1Q12789 2109 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 IGHV2OR16-5A0A0B4J2B6 119 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 A0A1B0GW64 132 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 ODAMA1E959 279 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 VSTM2BA6NLU5 285 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 LILRA1O75019 489 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 HSPB1P04792 205 aaKnown RBP11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 ATP6V0CP27449 155 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 PSMB5P28074 263 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 HNRNPA3P51991 378 aaKnown RBP11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 RUNX1Q01196 453 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 SHHQ15465 462 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 MORN1Q5T089 497 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 FKBP1CQ5VVH2 108 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 FAM166AQ6J272 317 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 TEX43Q6ZNM6 134 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 ZC2HC1AQ96GY0 325 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 SLC22A12Q96S37 553 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 HSPB9Q9BQS6 159 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 WDR76Q9H967 626 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 PATZ1Q9HBE1 687 aaKnown RBP11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 TMEM106BQ9NUM4 274 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 EHFQ9NZC4 300 aa11.05□□□□□ -0.64
SLC28A1-203ENST00000394573 IGLV3-16A0A075B6K0 115 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 CCDC163A0A0D9SF12 145 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 SMIM35A0A1B0GVV1 85 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 GDF9O60383 454 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 LYPD3O95274 346 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 CTSDP07339 412 aaPredicted RBP11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 SSR2P43308 183 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 TMEM225Q6GV28 225 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 TMCO2Q7Z6W1 182 aaPredicted RBP11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 RCBTB1Q8NDN9 531 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 CLDND2Q8NHS1 167 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 RASL10BQ96S79 203 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 CALHM2Q9HA72 323 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 SLC25A13Q9UJS0 675 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 ABT1Q9ULW3 272 aaKnown RBP11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 LAMA2P24043 3122 aaKnown RBP11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 LMX1BO60663 402 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 OR6A2O95222 327 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 ABHD16AO95870 558 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 PFN1P07737 140 aaKnown RBP11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 GALR1P47211 349 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 TMEM241Q24JQ0 296 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 SP6Q3SY56 376 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 LINC01590Q5TEZ4 76 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 C1QL3Q5VWW1 255 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 ZNF595Q8IYB9 648 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 NKAIN3Q8N8D7 197 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 OR5D18Q8NGL1 313 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 BTF3L4Q96K17 158 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 GJD4Q96KN9 370 aaPredicted RBP11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 TMEM56Q96MV1 263 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 HIPK2Q9H2X6 1198 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 TMEM56-RWDD3S4R434 201 aa11.04□□□□□ -0.64
SLC28A1-203ENST00000394573 RANBP2P49792 3224 aaKnown RBP11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 TRAV39A0A0B4J263 110 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 B4DEV8 164 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 ZNF217O75362 1048 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 C1orf105O95561 183 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 ARR3P36575 388 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 NKX2-1P43699 371 aaPredicted RBP11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 RABIFP47224 123 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 DMWDQ09019 674 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 ZNF506Q5JVG8 444 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 WDR73Q6P4I2 378 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 CPEB2Q7Z5Q1 589 aaKnown RBP11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 OR56A1Q8NGH5 318 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 FAM3CQ92520 227 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 NICN1Q9BSH3 213 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 MS4A8Q9BY19 250 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 TAC3Q9UHF0 121 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 MPDZO75970 2070 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 ZNF891A8MT65 544 aaPredicted RBP11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 YPEL1O60688 119 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 TBX19O60806 448 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 TIMP1P01033 207 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 IFNA21P01568 189 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 CORO1AP31146 461 aaKnown RBP11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 PTGER4P35408 488 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 RBMXP38159 391 aaKnown RBP11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 PSG6Q00889 435 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 PRR27Q6MZM9 219 aa11.03□□□□□ -0.64
SLC28A1-203ENST00000394573 MYPOPQ86VE0 399 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms