RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 PTTG3PQ9NZH4 202 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 ANAPC10Q9UM13 185 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 NOP16Q9Y3C1 178 aaKnown RBP13.02□□□□□ -0.32
GPC3-202ENST00000394299 U3KQ87 197 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 MUC6Q6W4X9 2439 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 CEP250Q9BV73 2442 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 FAM221AA4D161 298 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 GEMIN2O14893 280 aaKnown RBP13.02□□□□□ -0.33
GPC3-202ENST00000394299 EFSO43281 561 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 SERPINA5P05154 406 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 PRKACBP22694 351 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 VAMP1P23763 118 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 ZNF680Q8NEM1 530 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 OR5M9Q8NGP3 310 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 SPSB4Q96A44 273 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 RNF122Q9H9V4 155 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 SVILO95425 2214 aa13.02□□□□□ -0.33
GPC3-202ENST00000394299 FIGNL2A6NMB9 653 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 TM4SF5O14894 197 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 ARPC5O15511 151 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 NPBWR2P48146 333 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 SORDQ00796 357 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 PDZK1IP1Q13113 114 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 ZBTB37Q5TC79 503 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 HOGA1Q86XE5 327 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 FBXL14Q8N1E6 418 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 OR13G1Q8NGZ3 307 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 OR51F2Q8NH61 342 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 TERB2Q8NHR7 220 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 RGCCQ9H4X1 137 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 FXYD6-FXYD2A0A087WZ82 144 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 ZNF816-ZNF321PA0A0X1KG74 233 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 C9orf170A2RU37 121 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 ANKRD34BA5PLL1 514 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 PRR33A8MZF0 331 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 XRCC2O43543 280 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 LILRA1O75019 489 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 NFYAP23511 347 aaPredicted RBP13.01□□□□□ -0.33
GPC3-202ENST00000394299 MPZP25189 248 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 CD34P28906 385 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 IL13RA1P78552 427 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 TSC22D1Q15714 1073 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 SMUG1Q53HV7 270 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 LHFPL2Q6ZUX7 228 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 OR5H2Q8NGV7 314 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 POM121L2Q96KW2 1035 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 HS3ST6Q96QI5 342 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 REPIN1Q9BWE0 567 aaKnown RBP13.01□□□□□ -0.33
GPC3-202ENST00000394299 PAPOLGQ9BWT3 736 aaKnown RBP13.01□□□□□ -0.33
GPC3-202ENST00000394299 FXYD6Q9H0Q3 95 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 GVINP1Q7Z2Y8 2422 aa13.01□□□□□ -0.33
GPC3-202ENST00000394299 PTPRBP23467 1997 aa13□□□□□ -0.33
GPC3-202ENST00000394299 ARHGAP21Q5T5U3 1957 aa13□□□□□ -0.33
GPC3-202ENST00000394299 MCRIP1C9JLW8 97 aa13□□□□□ -0.33
GPC3-202ENST00000394299 OPRM1P35372 400 aa13□□□□□ -0.33
GPC3-202ENST00000394299 NOVA1P51513 510 aaKnown RBP13□□□□□ -0.33
GPC3-202ENST00000394299 FUT6P51993 359 aa13□□□□□ -0.33
GPC3-202ENST00000394299 KCTD9Q7L273 389 aa13□□□□□ -0.33
GPC3-202ENST00000394299 MYPOPQ86VE0 399 aaPredicted RBP13□□□□□ -0.33
GPC3-202ENST00000394299 SULT4A1Q9BR01 284 aa13□□□□□ -0.33
GPC3-202ENST00000394299 C5orf66Q9H5L9 145 aa13□□□□□ -0.33
GPC3-202ENST00000394299 SLC7A11Q9UPY5 501 aa13□□□□□ -0.33
GPC3-202ENST00000394299 PRR14LQ5THK1 2151 aa13□□□□□ -0.33
GPC3-202ENST00000394299 F8VVB4 439 aa13□□□□□ -0.33
GPC3-202ENST00000394299 F8VWA3 439 aa13□□□□□ -0.33
GPC3-202ENST00000394299 LRP3O75074 770 aa13□□□□□ -0.33
GPC3-202ENST00000394299 WNT5AP41221 380 aa13□□□□□ -0.33
GPC3-202ENST00000394299 OR3A3P47888 321 aa13□□□□□ -0.33
GPC3-202ENST00000394299 OR3A2P47893 321 aa13□□□□□ -0.33
GPC3-202ENST00000394299 ATP1B3P54709 279 aa13□□□□□ -0.33
GPC3-202ENST00000394299 LRRC37A5PQ49AS3 106 aa13□□□□□ -0.33
GPC3-202ENST00000394299 FBXW9Q5XUX1 488 aa13□□□□□ -0.33
GPC3-202ENST00000394299 RPUSD3Q6P087 351 aaKnown RBP13□□□□□ -0.33
GPC3-202ENST00000394299 SLC25A26Q70HW3 274 aa13□□□□□ -0.33
GPC3-202ENST00000394299 LYG2Q86SG7 212 aa13□□□□□ -0.33
GPC3-202ENST00000394299 ZDHHC22Q8N966 263 aa13□□□□□ -0.33
GPC3-202ENST00000394299 TRIB1Q96RU8 372 aa13□□□□□ -0.33
GPC3-202ENST00000394299 MYOZ1Q9NP98 299 aaPredicted RBP13□□□□□ -0.33
GPC3-202ENST00000394299 DLL3Q9NYJ7 618 aa13□□□□□ -0.33
GPC3-202ENST00000394299 EHFQ9NZC4 300 aa13□□□□□ -0.33
GPC3-202ENST00000394299 KCNN3Q9UGI6 736 aa13□□□□□ -0.33
GPC3-202ENST00000394299 AK3Q9UIJ7 227 aa13□□□□□ -0.33
GPC3-202ENST00000394299 DMXL2Q8TDJ6 3036 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 OR6C65A6NJZ3 312 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 FAM25EA8MYX2 175 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 PPP3CBP16298 524 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 OPCMLQ14982 345 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 VAX1Q5SQQ9 334 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 SPATA46Q5T0L3 261 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 AADACL3Q5VUY0 350 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 P4HA3Q7Z4N8 544 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 MDP1Q86V88 176 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 OR8H3Q8N146 312 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 OR1K1Q8NGR3 316 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 BCL2L2Q92843 193 aaPredicted RBP12.99□□□□□ -0.33
GPC3-202ENST00000394299 EMG1Q92979 244 aaKnown RBP12.99□□□□□ -0.33
GPC3-202ENST00000394299 WBP1Q96G27 269 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 TMPRSS13Q9BYE2 586 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.99□□□□□ -0.33
GPC3-202ENST00000394299 ZNF391Q9UJN7 358 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms