RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 ELL3Q9HB65 397 aaPredicted RBP19.77■□□□□ 0.75
CNN3-202ENST00000394202 V9GYH0 126 aa19.77■□□□□ 0.75
CNN3-202ENST00000394202 TMEM14DPA8MWL7 114 aa19.76■□□□□ 0.75
CNN3-202ENST00000394202 PRSS44E7EML9 344 aa19.76■□□□□ 0.75
CNN3-202ENST00000394202 APOA1P02647 267 aa19.76■□□□□ 0.75
CNN3-202ENST00000394202 GRPP07492 148 aa19.76■□□□□ 0.75
CNN3-202ENST00000394202 APOBEC3AP31941 199 aaPredicted RBP19.76■□□□□ 0.75
CNN3-202ENST00000394202 ASCL4Q6XD76 172 aa19.76■□□□□ 0.75
CNN3-202ENST00000394202 CENPSQ8N2Z9 138 aa19.76■□□□□ 0.75
CNN3-202ENST00000394202 KLF2Q9Y5W3 355 aaPredicted RBP19.76■□□□□ 0.75
CNN3-202ENST00000394202 F8VVB4 439 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 F8VWA3 439 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 RHBDL1O75783 438 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 SFTPBP07988 381 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 NPBWR2P48146 333 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 ART1P52961 327 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 SCAND1P57086 179 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 MPPED2Q15777 294 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 IZUMO1Q8IYV9 350 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 SCCPDHQ8NBX0 429 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 CPNE2Q96FN4 548 aaPredicted RBP19.75■□□□□ 0.75
CNN3-202ENST00000394202 HELZ2Q9BYK8 2649 aaKnown RBP19.75■□□□□ 0.75
CNN3-202ENST00000394202 ABCG5Q9H222 651 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 CRYBG3Q68DQ2 2970 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 KDM4BO94953 1096 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 CLDN1O95832 211 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 SERPINA2P20848 420 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 ETV6P41212 452 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 ZNF81P51508 661 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 PRAMEF6Q5VXH4 476 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 ZNF573Q86YE8 665 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 SLAMF9Q96A28 289 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 ELMOD3Q96FG2 381 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 SOSTQ9BQB4 213 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 CXXC4Q9H2H0 198 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 MTCH1Q9NZJ7 389 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 EXTL2Q9UBQ6 330 aa19.75■□□□□ 0.75
CNN3-202ENST00000394202 HOXA4Q00056 320 aaPredicted RBP19.74■□□□□ 0.75
CNN3-202ENST00000394202 SPANXN2Q5MJ10 180 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 C11orf53Q8IXP5 236 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 ZNF488Q96MN9 340 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 DHRS9Q9BPW9 319 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 CACNA1DQ01668 2161 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 CLEC18AA5D8T8 446 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 CDIPTO14735 213 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 CRTAPO75718 401 aaPredicted RBP19.74■□□□□ 0.75
CNN3-202ENST00000394202 IGHV1-46P01743 117 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 DAZAP2Q15038 168 aaPredicted RBP19.74■□□□□ 0.75
CNN3-202ENST00000394202 CLEC18BQ6UXF7 455 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 ZNF826PQ6ZT77 177 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 CLEC18CQ8NCF0 446 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 AQP3Q92482 292 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 CYYR1Q96J86 154 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 S100A13Q99584 98 aa19.74■□□□□ 0.75
CNN3-202ENST00000394202 NOP16Q9Y3C1 178 aaKnown RBP19.74■□□□□ 0.75
CNN3-202ENST00000394202 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.73■□□□□ 0.75
CNN3-202ENST00000394202 A1L4Q6 167 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 LRP5LA4QPB2 252 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 FABP12A6NFH5 140 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 VSTM5A8MXK1 200 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 J3QKU1 62 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 CDC14BO60729 498 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 CTAG2O75638 210 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 MPIG6BO95866 241 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 HNRNPCP07910 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
CNN3-202ENST00000394202 RSU1Q15404 277 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 ZNF79Q15937 498 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 PXT1Q8NFP0 134 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 CMTM3Q96MX0 182 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 OR2V2Q96R30 315 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 NICN1Q9BSH3 213 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 UFSP2Q9NUQ7 469 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 FBLN5Q9UBX5 448 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 RAB22AQ9UL26 194 aa19.73■□□□□ 0.75
CNN3-202ENST00000394202 UBBP0CG47 229 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 BCL3P20749 454 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 CDK2P24941 298 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 MPZP25189 248 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 MOGAT2Q3SYC2 334 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 FAM131AQ6UXB0 335 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 SPERTQ8NA61 448 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 KCNG3Q8TAE7 436 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 METTL9Q9H1A3 318 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 ATG5Q9H1Y0 275 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 NKIRAS2Q9NYR9 191 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 GHRLQ9UBU3 117 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 ADAM30Q9UKF2 790 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 USP9YO00507 2555 aaPredicted RBP19.72■□□□□ 0.75
CNN3-202ENST00000394202 A0A0A6YYD4 124 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 A0A0G2JMP0 313 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 A0A0X1KG70 313 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 A6NNC1 897 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 HTR3BO95264 441 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 MGMTP16455 207 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 RTN4RL2Q86UN3 420 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 ZSCAN4Q8NAM6 433 aaPredicted RBP19.72■□□□□ 0.75
CNN3-202ENST00000394202 OR4M2Q8NGB6 313 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 LPAR5Q9H1C0 372 aa19.72■□□□□ 0.75
CNN3-202ENST00000394202 RBFOX1Q9NWB1 397 aaKnown RBP19.72■□□□□ 0.75
CNN3-202ENST00000394202 TMEM210A6NLX4 147 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms