RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 C4orf36Q96KX1 117 aa25.4■■□□□ 1.66
CMTM4-202ENST00000394106 DUX5Q96PT3 197 aa25.4■■□□□ 1.66
CMTM4-202ENST00000394106 SIRPDQ9H106 197 aa25.4■■□□□ 1.66
CMTM4-202ENST00000394106 RASL12Q9NYN1 266 aa25.4■■□□□ 1.66
CMTM4-202ENST00000394106 ONECUT1Q9UBC0 465 aa25.4■■□□□ 1.66
CMTM4-202ENST00000394106 SLC25A10Q9UBX3 287 aaPredicted RBP25.4■■□□□ 1.66
CMTM4-202ENST00000394106 SLC7A11Q9UPY5 501 aa25.4■■□□□ 1.66
CMTM4-202ENST00000394106 IGKV1D-17A0A075B6S4 117 aa25.39■■□□□ 1.66
CMTM4-202ENST00000394106 HTR1AP08908 422 aa25.39■■□□□ 1.66
CMTM4-202ENST00000394106 ACAA1P09110 424 aaPredicted RBP25.39■■□□□ 1.66
CMTM4-202ENST00000394106 ACTA2P62736 377 aa25.39■■□□□ 1.66
CMTM4-202ENST00000394106 ACTG2P63267 376 aa25.39■■□□□ 1.66
CMTM4-202ENST00000394106 BAMBIQ13145 260 aa25.39■■□□□ 1.66
CMTM4-202ENST00000394106 LHFPL3Q86UP9 236 aa25.39■■□□□ 1.66
CMTM4-202ENST00000394106 ANGPTL5Q86XS5 388 aa25.39■■□□□ 1.66
CMTM4-202ENST00000394106 BATF2Q8N1L9 274 aa25.39■■□□□ 1.66
CMTM4-202ENST00000394106 MRPL48Q96GC5 212 aaKnown RBP25.39■■□□□ 1.66
CMTM4-202ENST00000394106 FRRS1LQ9P0K9 344 aa25.39■■□□□ 1.66
CMTM4-202ENST00000394106 MYRFQ9Y2G1 1151 aa25.39■■□□□ 1.66
CMTM4-202ENST00000394106 POLDIP2Q9Y2S7 368 aa25.39■■□□□ 1.66
CMTM4-202ENST00000394106 DNAJC9-AS1A6NH13 148 aa25.38■■□□□ 1.65
CMTM4-202ENST00000394106 GPR37O15354 613 aa25.38■■□□□ 1.65
CMTM4-202ENST00000394106 SIGLEC5O15389 551 aa25.38■■□□□ 1.65
CMTM4-202ENST00000394106 NDUFB7P17568 137 aa25.38■■□□□ 1.65
CMTM4-202ENST00000394106 NANOS3P60323 173 aaKnown RBP25.38■■□□□ 1.65
CMTM4-202ENST00000394106 UBE2V2Q15819 145 aa25.38■■□□□ 1.65
CMTM4-202ENST00000394106 SMIM21Q3B7S5 101 aa25.38■■□□□ 1.65
CMTM4-202ENST00000394106 RUSC1-AS1Q66K80 236 aa25.38■■□□□ 1.65
CMTM4-202ENST00000394106 ACP7Q6ZNF0 438 aa25.38■■□□□ 1.65
CMTM4-202ENST00000394106 RDH12Q96NR8 316 aa25.38■■□□□ 1.65
CMTM4-202ENST00000394106 ALG8Q9BVK2 526 aa25.38■■□□□ 1.65
CMTM4-202ENST00000394106 MDFIC2A0A1B0GVS7 189 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 GATBO75879 557 aaKnown RBP25.37■■□□□ 1.65
CMTM4-202ENST00000394106 FADS2O95864 444 aaKnown RBP25.37■■□□□ 1.65
CMTM4-202ENST00000394106 PGA5P0DJD9 388 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 RCN1Q15293 331 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 TMEM244Q5VVB8 128 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 LPCAT4Q643R3 524 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 CALHM1Q8IU99 346 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 LY6G5BQ8NDX9 201 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 APH1BQ8WW43 257 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 PELI1Q96FA3 418 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 DCTN5Q9BTE1 182 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 CHST5Q9GZS9 411 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 ZNF222Q9UK12 451 aa25.37■■□□□ 1.65
CMTM4-202ENST00000394106 NXPH2O95156 264 aa25.36■■□□□ 1.65
CMTM4-202ENST00000394106 SERPINA3P01011 423 aa25.36■■□□□ 1.65
CMTM4-202ENST00000394106 GALEQ14376 348 aa25.36■■□□□ 1.65
CMTM4-202ENST00000394106 PDCD1Q15116 288 aa25.36■■□□□ 1.65
CMTM4-202ENST00000394106 FDX2Q6P4F2 183 aa25.36■■□□□ 1.65
CMTM4-202ENST00000394106 ZNRF1Q8ND25 227 aa25.36■■□□□ 1.65
CMTM4-202ENST00000394106 TMEM185AQ8NFB2 350 aa25.36■■□□□ 1.65
CMTM4-202ENST00000394106 LHX4Q969G2 390 aa25.36■■□□□ 1.65
CMTM4-202ENST00000394106 MYCBPQ99417 103 aaPredicted RBP25.36■■□□□ 1.65
CMTM4-202ENST00000394106 RPL36Q9Y3U8 105 aaKnown RBP25.36■■□□□ 1.65
CMTM4-202ENST00000394106 CENPVL3A0A0U1RRI6 287 aa25.35■■□□□ 1.65
CMTM4-202ENST00000394106 RAB40BQ12829 278 aa25.35■■□□□ 1.65
CMTM4-202ENST00000394106 GCDHQ92947 438 aaPredicted RBP25.35■■□□□ 1.65
CMTM4-202ENST00000394106 ISG20L2Q9H9L3 353 aaKnown RBP25.35■■□□□ 1.65
CMTM4-202ENST00000394106 ELL3Q9HB65 397 aaPredicted RBP25.35■■□□□ 1.65
CMTM4-202ENST00000394106 MAB21L2Q9Y586 359 aa25.35■■□□□ 1.65
CMTM4-202ENST00000394106 KPTNQ9Y664 436 aa25.35■■□□□ 1.65
CMTM4-202ENST00000394106 RFPL4AA6NLU0 287 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 ANKRD65E5RJM6 399 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 RFPL4AL1F8VTS6 287 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 IGHA1P01876 353 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 MPZP25189 248 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 FUT6P51993 359 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 CAPZA1P52907 286 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 BPIFB3P59826 476 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 DEFB112Q30KQ8 113 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 C12orf54Q6X4T0 127 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 VMO1Q7Z5L0 202 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 PDZD9Q8IXQ8 264 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 CMTM4Q8IZR5 234 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 OR52I1Q8NGK6 324 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 CYGBQ8WWM9 190 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 C10orf35Q96D05 121 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 ADAT3Q96EY9 351 aaPredicted RBP25.34■■□□□ 1.65
CMTM4-202ENST00000394106 C1orf147Q96MC9 270 aaPredicted RBP25.34■■□□□ 1.65
CMTM4-202ENST00000394106 NRIP2Q9BQI9 281 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 PKIBQ9C010 78 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 ERVK13-1Q9NX77 482 aa25.34■■□□□ 1.65
CMTM4-202ENST00000394106 NOS1APO75052 506 aaPredicted RBP25.33■■□□□ 1.65
CMTM4-202ENST00000394106 CLIC3O95833 236 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 ISG15P05161 165 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 ZNF20P17024 532 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 PRTN3P24158 256 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 PEX2P28328 305 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 CEBPDP49716 269 aaPredicted RBP25.33■■□□□ 1.65
CMTM4-202ENST00000394106 CCR9P51686 369 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 CAV3P56539 151 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 CNN3Q15417 329 aaKnown RBP25.33■■□□□ 1.65
CMTM4-202ENST00000394106 SMN1Q16637 294 aaKnown RBP25.33■■□□□ 1.65
CMTM4-202ENST00000394106 CD177Q8N6Q3 437 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 GATAD2BQ8WXI9 593 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 PP6455Q8WZ26 134 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 ZDHHC16Q969W1 377 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 FGGYQ96C11 551 aa25.33■■□□□ 1.65
CMTM4-202ENST00000394106 BORCS8Q96FH0 119 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms