RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 REC114Q7Z4M0 266 aa14.2□□□□□ -0.14
SNRPA1-202ENST00000394082 TMEM179BQ7Z7N9 219 aa14.2□□□□□ -0.14
SNRPA1-202ENST00000394082 ZNF573Q86YE8 665 aa14.2□□□□□ -0.14
SNRPA1-202ENST00000394082 AQP12AQ8IXF9 295 aa14.2□□□□□ -0.14
SNRPA1-202ENST00000394082 MKXQ8IYA7 352 aa14.2□□□□□ -0.14
SNRPA1-202ENST00000394082 CCDC197Q8NCU1 140 aa14.2□□□□□ -0.14
SNRPA1-202ENST00000394082 PIFOQ8TCI5 191 aa14.2□□□□□ -0.14
SNRPA1-202ENST00000394082 DNAJC9Q8WXX5 260 aa14.2□□□□□ -0.14
SNRPA1-202ENST00000394082 TEAD3Q99594 435 aa14.2□□□□□ -0.14
SNRPA1-202ENST00000394082 GPR84Q9NQS5 396 aa14.2□□□□□ -0.14
SNRPA1-202ENST00000394082 POLDIP2Q9Y2S7 368 aa14.2□□□□□ -0.14
SNRPA1-202ENST00000394082 DHRS7CA6NNS2 312 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 J3QT63 122 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 DLGAP1O14490 977 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 GNGT2O14610 69 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 NRASP01111 189 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 PRDX2P32119 198 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 RPS7P62081 194 aaKnown RBP14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 APOFQ13790 326 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 PLCXD3Q63HM9 321 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 Q6ZSR3 168 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 MOB3CQ70IA8 216 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 Q8N2B8 174 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 CD177Q8N6Q3 437 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 BBS1Q8NFJ9 593 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 OR51E1Q8TCB6 317 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 RORBQ92753 470 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 PPP1R14AQ96A00 147 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 CLPTM1LQ96KA5 538 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 OR8B4Q96RC9 309 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 MOB1AQ9H8S9 216 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 HES4Q9HCC6 221 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 ZNF281Q9Y2X9 895 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 SIGLEC9Q9Y336 463 aa14.19□□□□□ -0.14
SNRPA1-202ENST00000394082 RBP4P02753 201 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 MPZP25189 248 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 RIDAP52758 137 aaKnown RBP14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 CAPZA1P52907 286 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 LGALS4P56470 323 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 ERVFRD-1P60508 538 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 ZNF684Q5T5D7 378 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 KLHDC1Q8N7A1 406 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 CANT1Q8WVQ1 401 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 NRIP2Q9BQI9 281 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 FAM53CQ9NYF3 392 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 PIGLQ9Y2B2 252 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 PLXNB1O43157 2135 aa14.18□□□□□ -0.14
SNRPA1-202ENST00000394082 MEGF11A6BM72 1044 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 C17orf98A8MV24 154 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 G3V4G9 280 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 TK1P04183 234 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 T-ENOLP0DO92 83 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 FAHP16930 419 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 HAAOP46952 286 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 HCCSP53701 268 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 LY6EQ16553 131 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 CLVS2Q5SYC1 327 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 COMMD2Q86X83 199 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 FOXRED1Q96CU9 486 aaPredicted RBP14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 MALSU1Q96EH3 234 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 MNTQ99583 582 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 TAS2R1Q9NYW7 299 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 DNAJB9Q9UBS3 223 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 FOXJ3Q9UPW0 622 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 TBL2Q9Y4P3 447 aaKnown RBP14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 V9GYS6 101 aa14.17□□□□□ -0.14
SNRPA1-202ENST00000394082 PQLC2LA1A4F0 135 aa14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 CCDC182A6NF36 153 aa14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 CHST1O43916 411 aa14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 SRSF10O75494 262 aaKnown RBP14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 TTRP02766 147 aa14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 ACTR3P61158 418 aa14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 ERVK11-1P61568 191 aa14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 EMX1Q04741 257 aaPredicted RBP14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 SNAPC1Q16533 368 aa14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 OR2T27Q8NH04 317 aa14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 CCDC124Q96CT7 223 aaKnown RBP14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 NRBF2Q96F24 287 aa14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.16□□□□□ -0.14
SNRPA1-202ENST00000394082 PRR32B1ATL7 298 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 K7N7A8 449 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 PSMD9O00233 223 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 SYNGR1O43759 233 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 XPNPEP2O43895 674 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 NXPH2O95156 264 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 DYNLT3P51808 116 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 DLX6P56179 175 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 TMEM236Q5W0B7 351 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 ELMOD2Q8IZ81 293 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 OR11H6Q8NGC7 330 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 WIPF2Q8TF74 440 aaPredicted RBP14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 CNN2Q99439 309 aaKnown RBP14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 PRRG3Q9BZD7 231 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 PKIBQ9C010 78 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 SERTAD4Q9NUC0 356 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 PITPNC1Q9UKF7 332 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 COPS3Q9UNS2 423 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 TCF19Q9Y242 345 aa14.15□□□□□ -0.14
SNRPA1-202ENST00000394082 ODF3BA8MYP8 253 aa14.14□□□□□ -0.15
SNRPA1-202ENST00000394082 LOC110117498-PIK3R3F6TDL0 507 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms