RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 UQCC1Q9NVA1 299 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 CACNA1HO95180 2353 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 CCDC163A0A0D9SF12 145 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 SPRY1O43609 319 aaPredicted RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 RAMP1O60894 148 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 VAMP5O95183 116 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 PDGFBP01127 241 aaPredicted RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 FAM157BP0CG42 384 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 VSIG8P0DPA2 414 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 PRF1P14222 555 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 MMP16P51512 607 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 SCAND1P57086 179 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 PPIAP62937 165 aaKnown RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 KISS1Q15726 138 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 RSPO4Q2I0M5 234 aaPredicted RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 OR2A2Q6IF42 318 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 TGIF2LXQ8IUE1 241 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 SEMA6DQ8NFY4 1073 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 FNDC9Q8TBE3 224 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 DNASE2BQ8WZ79 361 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 KCNK17Q96T54 332 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 PRDM6Q9NQX0 595 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 CSAG2Q9Y5P2 127 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 ADAM10O14672 748 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 SCAF4O95104 1147 aaKnown RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 PNLIPP16233 465 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 ZNF16P17020 682 aaPredicted RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 S100GP29377 79 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 RBP2P50120 134 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 TAS2R46P59540 309 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 BRICD5Q6PL45 260 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 MRPL21Q7Z2W9 205 aaKnown RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 BAP18Q8IXM2 172 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 C20orf196Q8IYI0 205 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 SUMF2Q8NBJ7 301 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 OR2M3Q8NG83 312 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 ZNF385AQ96PM9 386 aaKnown RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 MED9Q9NWA0 146 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 FBXO7Q9Y3I1 522 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 RFPL4AA6NLU0 287 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 RFPL4AL1F8VTS6 287 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 RNASEK-C17orf49H0YIS7 233 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 RBMXL2O75526 392 aaKnown RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 HPP00738 406 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 MT-ND4LP03901 98 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 CPN1P15169 458 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 NDUFB7P17568 137 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 GNRHRP30968 328 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 IDH3GP51553 393 aaPredicted RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 VAMP2P63027 116 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 RPP30P78346 268 aaKnown RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 ARL6IP1Q15041 203 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 CNN3Q15417 329 aaKnown RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 PHLDA2Q53GA4 152 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 LYG2Q86SG7 212 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 MRPL41Q8IXM3 137 aaKnown RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 DEFB123Q8N688 67 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 TOX3O15405 576 aaPredicted RBP9.31□□□□□ -0.92
CALD1-203ENST00000393118 KCNAB3O43448 404 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 ATP1B3P54709 279 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 STPG1Q5TH74 334 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 PRR18Q8N4B5 295 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 CLEC1AQ8NC01 280 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 TERB2Q8NHR7 220 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 REG4Q9BYZ8 158 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 SLC5A7Q9GZV3 580 aa9.31□□□□□ -0.92
CALD1-203ENST00000393118 HMSDA8MTL9 139 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 ZNF587BE7ETH6 402 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 GPR37O15354 613 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 F2RL1P55085 397 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 SHBQ15464 509 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 TMEM104Q8NE00 496 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 DTD1Q8TEA8 209 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 CDX2Q99626 313 aaPredicted RBP9.3□□□□□ -0.92
CALD1-203ENST00000393118 PBDC1Q9BVG4 233 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 LRFN1Q9P244 771 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 KLK13Q9UKR3 277 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 KPTNQ9Y664 436 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 ALPK3Q96L96 1907 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 H3BMH7 237 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 NME2P1O60361 137 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 CBR3O75828 277 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 ZNF205O95201 554 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 SCGB1D1O95968 90 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 SPINK2P20155 84 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 DSCR4P56555 118 aaPredicted RBP9.3□□□□□ -0.92
CALD1-203ENST00000393118 UBE2KP61086 200 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 MALLQ13021 153 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 IL11RAQ14626 422 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 IAH1Q2TAA2 248 aaPredicted RBP9.3□□□□□ -0.92
CALD1-203ENST00000393118 CEACAM16Q2WEN9 425 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 SOHLH1Q5JUK2 328 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 OR6K3Q8NGY3 331 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 OR6X1Q8NH79 312 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 RRNAD1Q96FB5 475 aaKnown RBP9.3□□□□□ -0.92
CALD1-203ENST00000393118 BSCL2Q96G97 398 aaPredicted RBP9.3□□□□□ -0.92
CALD1-203ENST00000393118 SOX7Q9BT81 388 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 RASL12Q9NYN1 266 aa9.3□□□□□ -0.92
CALD1-203ENST00000393118 BOKQ9UMX3 212 aaPredicted RBP9.3□□□□□ -0.92
CALD1-203ENST00000393118 UBE2J1Q9Y385 318 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms