RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TSPAN19P0C672 248 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 GAGE12FP0CL80 117 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 GAGE12GP0CL81 117 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 GAGE12IP0CL82 117 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 MYL12AP19105 171 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 CMA1P23946 247 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 KIR3DL2P43630 455 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 RARRES1P49788 294 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 RND3P61587 244 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 GAGE1Q13065 139 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 GAGE4Q13068 117 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 CDK10Q15131 360 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 NECTIN1Q15223 517 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 CASP12Q6UXS9 341 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 C2orf73Q8N5S3 287 aaPredicted RBP2.99□□□□□ -1.93
XRN1-202ENST00000392981 EIF4E3Q8N5X7 224 aaKnown RBP2.99□□□□□ -1.93
XRN1-202ENST00000392981 OR9I1Q8NGQ6 314 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 TLCD1Q96CP7 247 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 PIK3IP1Q96FE7 263 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 MCHR1Q99705 422 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 HSD17B14Q9BPX1 270 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 THYN1Q9P016 225 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 HES2Q9Y543 173 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 KDM6AO15550 1401 aaPredicted RBP2.99□□□□□ -1.93
XRN1-202ENST00000392981 TRAV19A0A0A6YYK7 116 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 KIR2DL5BA0A0G2JN68 375 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 KIR2DL5BA0A0G2JPC4 375 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 MDFIC2A0A1B0GVS7 189 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 CD5P06127 495 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 HCKP08631 526 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 RAB13P51153 203 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 RAB38P57729 211 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 ERVK-16P61578 105 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 PPP1CBP62140 327 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 FOXF2Q12947 444 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 GTF2H5Q6ZYL4 71 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 KIR2DL5AQ8N109 375 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 KIR2DL5BQ8NHK3 375 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 TCEAL3Q969E4 200 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 FGGYQ96C11 551 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 C12orf43Q96C57 262 aaKnown RBP2.99□□□□□ -1.93
XRN1-202ENST00000392981 SMARCD1Q96GM5 515 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 GPR21Q99679 349 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 MRPL20Q9BYC9 149 aaKnown RBP2.99□□□□□ -1.93
XRN1-202ENST00000392981 ALX4Q9H161 411 aaPredicted RBP2.99□□□□□ -1.93
XRN1-202ENST00000392981 MED11Q9P086 117 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 HEBP2Q9Y5Z4 205 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 TRAPPC8Q9Y2L5 1435 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 KIAA1551Q9HCM1 1747 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 NCANO14594 1321 aa2.99□□□□□ -1.93
XRN1-202ENST00000392981 CICQ96RK0 1608 aaPredicted RBP2.99□□□□□ -1.93
XRN1-202ENST00000392981 SBF2Q86WG5 1849 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 FRYQ5TBA9 3013 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 A0A1B0GU03 582 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 CRXO43186 299 aaPredicted RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 TNFSF12O43508 249 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 ATG12O94817 140 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 SLC25A27O95847 323 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 HLA-AP01891 365 aaKnown RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 YAP1P46937 504 aaKnown RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 PMVKQ15126 192 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 RGNQ15493 299 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 GRK1Q15835 563 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 HSD17B12Q53GQ0 312 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 PYDC2Q56P42 97 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 PIGGQ5H8A4 983 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 HAGHLQ6PII5 290 aaPredicted RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 RBMS3Q6XE24 437 aaKnown RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 ZNF620Q6ZNG0 422 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 ARRDC1Q8N5I2 433 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 VN1R2Q8NFZ6 395 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 OR9A4Q8NGU2 314 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 OR5H6Q8NGV6 325 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 OR1S1Q8NH92 325 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 SMIM19Q96E16 107 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 PDXPQ96GD0 296 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 SFRP2Q96HF1 295 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 FOPNLQ96NB1 174 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 CST11Q9H112 138 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 SLCO1B3Q9NPD5 702 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 IL1RAPQ9NPH3 570 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 APOBEC3BQ9UH17 382 aaKnown RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 KLHL21Q9UJP4 597 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 NRAPQ86VF7 1730 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 A0A087X1B8 175 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 E9PAM4 449 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 TPST1O60507 370 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 IFNA7P01567 189 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 CD55P08174 381 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 OR4A8P0C604 315 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 SMIM10L1P0DMW3 83 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 COX4I1P13073 169 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 APOC4P55056 127 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 TAS2R39P59534 338 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 OR7A5Q15622 319 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 ODF3L2Q3SX64 289 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 C1orf220Q5T0J3 134 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 CYB5R2Q6BCY4 276 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 FAM231DQ6ZW35 169 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 TMEM156Q8N614 296 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms