RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 OR2W3Q7Z3T1 314 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 PLPP6Q8IY26 295 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 ADPRHL1Q8NDY3 354 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 RBM14Q96PK6 669 aaKnown RBP13.29□□□□□ -0.28
CCDC50-201ENST00000392455 PSG11Q9UQ72 335 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 SHBQ15464 509 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 HFEQ30201 348 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 CALHM1Q8IU99 346 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 OR6S1Q8NH40 331 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 C19orf43Q9BQ61 176 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 ICAM5Q9UMF0 924 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 SUCLG1P53597 346 aaKnown RBP13.29□□□□□ -0.28
CCDC50-201ENST00000392455 IL13RA2Q14627 380 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 MICBQ29980 383 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 ACSM6Q6P461 480 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 NPEPL1Q8NDH3 523 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 PMCHL2Q9BQD1 86 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 OR6C3Q9NZP0 311 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 CEP250Q9BV73 2442 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 ALOX12BO75342 701 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 CD40P25942 277 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 CD96P40200 585 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 OR2B11Q5JQS5 317 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 MORN4Q8NDC4 146 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 TAS2R4Q9NYW5 299 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 GTF3C1Q12789 2109 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 IFITM5A6NNB3 132 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 ATOH8Q96SQ7 321 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 RAB1BQ9H0U4 201 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 TIAM2Q8IVF5 1701 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 ZC3H12DA2A288 527 aaKnown RBP13.28□□□□□ -0.28
CCDC50-201ENST00000392455 THBS4P35443 961 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 PTCRAQ6ISU1 281 aaPredicted RBP13.28□□□□□ -0.28
CCDC50-201ENST00000392455 C11orf87Q6NUJ2 197 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 T-ENOLP0DO92 83 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 ST6GAL1P15907 406 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 ARIH2OSQ8N7S6 290 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 KISS1RQ969F8 398 aaPredicted RBP13.28□□□□□ -0.28
CCDC50-201ENST00000392455 NXF2Q9GZY0 626 aaKnown RBP13.28□□□□□ -0.28
CCDC50-201ENST00000392455 LAT2Q9GZY6 243 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 ZXDAP98168 799 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 ETV3LQ6ZN32 361 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 SLC25A42Q86VD7 318 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 TEX101Q9BY14 249 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 GPR87Q9BY21 358 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 ONECUT1Q9UBC0 465 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 MAST2Q6P0Q8 1798 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 MKRN2OSH3BPM6 223 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 FAM26EQ8N5C1 309 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 ZNF768Q9H5H4 540 aaKnown RBP13.28□□□□□ -0.28
CCDC50-201ENST00000392455 TSPAN13O95857 204 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
CCDC50-201ENST00000392455 C6orf15Q6UXA7 325 aaPredicted RBP13.28□□□□□ -0.28
CCDC50-201ENST00000392455 CYSLTR2Q9NS75 346 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 PRTGQ2VWP7 1150 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 Q6ZPB1 254 aaPredicted RBP13.28□□□□□ -0.28
CCDC50-201ENST00000392455 OR52I2Q8NH67 350 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 SMPD2O60906 423 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 SLC6A12P48065 614 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 BTG2P78543 158 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 MISP3Q96FF7 219 aa13.28□□□□□ -0.28
CCDC50-201ENST00000392455 A0A1W2PNV4 684 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 IAPPP10997 89 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 RPA2P15927 270 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 HLA-GP17693 338 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 SMN1Q16637 294 aaKnown RBP13.27□□□□□ -0.28
CCDC50-201ENST00000392455 ZNF788Q6ZQV5 615 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 MARCH3Q86UD3 253 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 TMEM255BQ8WV15 326 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 ZNF707Q96C28 371 aaPredicted RBP13.27□□□□□ -0.28
CCDC50-201ENST00000392455 ZMAT3Q9HA38 289 aaKnown RBP13.27□□□□□ -0.28
CCDC50-201ENST00000392455 TMEM38BQ9NVV0 291 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 SLCO1C1Q9NYB5 712 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 DAPP51397 102 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 TWIST1Q15672 202 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 ISL2Q96A47 359 aa13.27□□□□□ -0.28
CCDC50-201ENST00000392455 EPXP11678 715 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 SLC48A1Q6P1K1 146 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 CMC2Q9NRP2 79 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 PIPOXQ9P0Z9 390 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 CACNG5Q9UF02 275 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 DOCK6Q96HP0 2047 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 SRP14P37108 136 aaKnown RBP13.27□□□□□ -0.29
CCDC50-201ENST00000392455 FOXO1Q12778 655 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 RRN3P1Q2M238 152 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 BVESQ8NE79 360 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 TMEM37Q8WXS4 190 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 CLEC1BQ9P126 229 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 WNK2Q9Y3S1 2297 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 D2HGDHQ8N465 521 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 BEND2Q8NDZ0 799 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 TXNIPQ9H3M7 391 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 BANF2Q9H503 90 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 GPR84Q9NQS5 396 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 LOC102724200A0A096LPH7 203 aaPredicted RBP13.27□□□□□ -0.29
CCDC50-201ENST00000392455 GNG3P63215 75 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 NKAIN1Q4KMZ8 207 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 COX20Q5RI15 118 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 TMEM88Q6PEY1 159 aa13.27□□□□□ -0.29
CCDC50-201ENST00000392455 STARD4Q96DR4 205 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms