RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 AKR1C2P52895 323 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 RAB4BP61018 213 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 RBX1P62877 108 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 QRFPP83859 136 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 AKR1C1Q04828 323 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 PEAR1Q5VY43 1037 aaPredicted RBP8.48□□□□□ -1.05
COL6A3-204ENST00000392003 CLEC9AQ6UXN8 241 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 OR13C8Q8NGS7 320 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 CASTOR1Q8WTX7 329 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 BANF2Q9H503 90 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 ELL3Q9HB65 397 aaPredicted RBP8.48□□□□□ -1.05
COL6A3-204ENST00000392003 HS3ST3B1Q9Y662 390 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 COL6A3P12111 3177 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 IGHV3-15A0A0B4J1V0 119 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 A0A0D9SG52 128 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 RPA2P15927 270 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 AKR1C4P17516 323 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 AVPR2P30518 371 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 TAS2R31P59538 309 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 HIST3H3Q16695 136 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 MICBQ29980 383 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 SLC22A6Q4U2R8 563 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 ZNF529Q6P280 563 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 SPNS3Q6ZMD2 512 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 SLC25A42Q86VD7 318 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 TMEM17Q86X19 198 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 NAXDQ8IW45 347 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 OR5AS1Q8N127 324 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 OR5M8Q8NGP6 311 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 RNASE8Q8TDE3 154 aaKnown RBP8.48□□□□□ -1.05
COL6A3-204ENST00000392003 PAQR8Q8TEZ7 354 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 CPNE2Q96FN4 548 aaPredicted RBP8.48□□□□□ -1.05
COL6A3-204ENST00000392003 SCGB3A2Q96PL1 93 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 LPAR5Q9H1C0 372 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 PLEK2Q9NYT0 353 aa8.48□□□□□ -1.05
COL6A3-204ENST00000392003 KANTRA0A1W2PQU2 76 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 OR5H14A6NHG9 310 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 KLK2P20151 261 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 OR3A4PP47883 348 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 OR3A2P47893 321 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 KCTD9Q7L273 389 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 OR9K2Q8NGE7 335 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 SPTSSAQ969W0 71 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 SGCZQ96LD1 299 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 VSIG4Q9Y279 399 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 RHBDD3Q9Y3P4 386 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 CNOT1A5YKK6 2376 aaKnown RBP8.47□□□□□ -1.05
COL6A3-204ENST00000392003 OR14I1A6ND48 311 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 MASP2O00187 686 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 CDC14BO60729 498 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 TRAPPC6AO75865 159 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 PMP2P02689 132 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 HIST1H1DP16402 221 aaKnown RBP8.47□□□□□ -1.05
COL6A3-204ENST00000392003 THBS4P35443 961 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 CASRP41180 1078 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 PNLIPRP3Q17RR3 467 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 TMEM108Q6UXF1 575 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 OR51T1Q8NGJ9 327 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 THAP6Q8TBB0 222 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 NPRL2Q8WTW4 380 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 NICN1Q9BSH3 213 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 OR10A2Q9H208 303 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 TP53TG5Q9Y2B4 290 aa8.47□□□□□ -1.05
COL6A3-204ENST00000392003 C5orf51A6NDU8 294 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 A6NNC1 897 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 NXPH2O95156 264 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 ZNF17P17021 662 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 AMY2BP19961 511 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 CCL1P22362 96 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 MPZP25189 248 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 MLF1P58340 268 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 MRPS11P82912 194 aaKnown RBP8.46□□□□□ -1.05
COL6A3-204ENST00000392003 PPP1R1AQ13522 171 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 LRRC37A5PQ49AS3 106 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 C10orf128Q5T292 105 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 FAHD2BQ6P2I3 314 aaPredicted RBP8.46□□□□□ -1.05
COL6A3-204ENST00000392003 PDZD9Q8IXQ8 264 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 BPIFCQ8NFQ6 507 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 OR5H2Q8NGV7 314 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 OR14L1PQ8NHC6 308 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 FAHD2AQ96GK7 314 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 SEC22AQ96IW7 307 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 PNRC2Q9NPJ4 139 aaKnown RBP8.46□□□□□ -1.05
COL6A3-204ENST00000392003 ZNF319Q9P2F9 582 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 CCSO14618 274 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 TNFSF11O14788 317 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 KLF7O75840 302 aaPredicted RBP8.46□□□□□ -1.05
COL6A3-204ENST00000392003 SPDEFO95238 335 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 F10P00742 488 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 OR8U8P0C7N1 319 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 ACP1P24666 158 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 ARL6IP1Q15041 203 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 SURF2Q15527 256 aaPredicted RBP8.46□□□□□ -1.05
COL6A3-204ENST00000392003 ARMC10Q8N2F6 343 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 TMEM104Q8NE00 496 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 OR14K1Q8NGZ2 314 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 TMEM54Q969K7 222 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 ZNF385AQ96PM9 386 aaKnown RBP8.46□□□□□ -1.05
COL6A3-204ENST00000392003 TAAR9Q96RI9 348 aa8.46□□□□□ -1.05
COL6A3-204ENST00000392003 UCN2Q96RP3 112 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms