RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 UBE2V2Q15819 145 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 ZNF684Q5T5D7 378 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 MOB1AQ9H8S9 216 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 KLF15Q9UIH9 416 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 PTPRDP23468 1912 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 A0A1W2PPC1 479 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 OR5H15A6NDH6 313 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 OR5H1A6NKK0 313 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 H0YIG0 161 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 CD79AP11912 226 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 RPS4Y1P22090 263 aaKnown RBP12.66□□□□□ -0.38
RTF1-201ENST00000389629 CAPZBP47756 277 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 HLA-DRB3P79483 266 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 THEM4Q5T1C6 240 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 EIF4E3Q8N5X7 224 aaKnown RBP12.66□□□□□ -0.38
RTF1-201ENST00000389629 ZNF320A2RRD8 509 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 CLN5O75503 358 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 FGF8P55075 233 aaPredicted RBP12.66□□□□□ -0.38
RTF1-201ENST00000389629 PRSS12P56730 875 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 CATSPERDQ86XM0 798 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 PLEKHF2Q9H8W4 249 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 UCK1Q9HA47 277 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 RYDENQ9NUL5 291 aaKnown RBP12.66□□□□□ -0.38
RTF1-201ENST00000389629 DOCK6Q96HP0 2047 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 J3QRE1 110 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 RRADP55042 308 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 PKIAP61925 76 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 PDLIM3Q53GG5 364 aaPredicted RBP12.65□□□□□ -0.38
RTF1-201ENST00000389629 TMEM240Q5SV17 173 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 LINC01590Q5TEZ4 76 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 FIP1L1Q6UN15 594 aaKnown RBP12.65□□□□□ -0.38
RTF1-201ENST00000389629 SLC16A14Q7RTX9 510 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 OR2C3Q8N628 320 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 TMEM74BQ9NUR3 256 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 SRPK3Q9UPE1 567 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 TRGC2P03986 189 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 SULT1A2P50226 295 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 DRAM2Q6UX65 266 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 GPR87Q9BY21 358 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 CEP290O15078 2479 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 FTCDNL1E5RQL4 147 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 PNPP00491 289 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 CFIP05156 583 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 BCKDHBP21953 392 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 SNCAP37840 140 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 ERVS71-1P61550 626 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 FOXF1Q12946 379 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 TOMM20LQ6UXN7 152 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 C16orf47Q6ZP98 133 aaPredicted RBP12.65□□□□□ -0.38
RTF1-201ENST00000389629 V9GYS6 101 aa12.65□□□□□ -0.38
RTF1-201ENST00000389629 RNF222A6NCQ9 220 aa12.65□□□□□ -0.39
RTF1-201ENST00000389629 MSGN1A6NI15 193 aa12.65□□□□□ -0.39
RTF1-201ENST00000389629 TNFSF14O43557 240 aa12.65□□□□□ -0.39
RTF1-201ENST00000389629 ADAM11O75078 769 aa12.65□□□□□ -0.39
RTF1-201ENST00000389629 HEXAP06865 529 aa12.65□□□□□ -0.39
RTF1-201ENST00000389629 FHITP49789 147 aa12.65□□□□□ -0.39
RTF1-201ENST00000389629 LIPHQ8WWY8 451 aa12.65□□□□□ -0.39
RTF1-201ENST00000389629 ANKRD10Q9NXR5 420 aa12.65□□□□□ -0.39
RTF1-201ENST00000389629 DOK5Q9P104 306 aa12.65□□□□□ -0.39
RTF1-201ENST00000389629 KNTC1P50748 2209 aa12.65□□□□□ -0.39
RTF1-201ENST00000389629 M0R135 149 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 COL9A1P20849 921 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 RNF4P78317 190 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 BHLHE23Q8NDY6 225 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 ZNF799Q96GE5 643 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 OR10C1Q96KK4 312 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 ESRP2Q9H6T0 727 aaKnown RBP12.64□□□□□ -0.39
RTF1-201ENST00000389629 PILRAQ9UKJ1 303 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 PLPP3O14495 311 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 SARGQ9BW04 601 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 RSPO3Q9BXY4 272 aaPredicted RBP12.64□□□□□ -0.39
RTF1-201ENST00000389629 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 LMX1BO60663 402 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 ZNF217O75362 1048 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 HOXC12P31275 282 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 CSNK1EP49674 416 aaKnown RBP12.64□□□□□ -0.39
RTF1-201ENST00000389629 DHODHQ02127 395 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 IQCJQ1A5X6 159 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 TM4SF19Q96DZ7 209 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 FOXQ1Q9C009 403 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 ST3GAL6Q9Y274 331 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 TP53BP1Q12888 1972 aaPredicted RBP12.64□□□□□ -0.39
RTF1-201ENST00000389629 A0A1W2PP11 408 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 METTL15P1P0C7V9 234 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 ACKR3P25106 362 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 GPR3P46089 330 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 CARD18P57730 90 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 CEBPEQ15744 281 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 SPRED2Q7Z698 418 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 ST8SIA1Q92185 356 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 ELSPBP1Q96BH3 223 aa12.64□□□□□ -0.39
RTF1-201ENST00000389629 GBF1Q92538 1859 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 A0A1B0GX78 115 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 KLK2P20151 261 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 SURF2Q15527 256 aaPredicted RBP12.63□□□□□ -0.39
RTF1-201ENST00000389629 FHL5Q5TD97 284 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 LYZL2Q7Z4W2 148 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 CDCA3Q99618 268 aaPredicted RBP12.63□□□□□ -0.39
RTF1-201ENST00000389629 IL17BQ9UHF5 180 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms