RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 DEFB133Q30KQ1 61 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 NKAIN3Q8N8D7 197 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 POC1AQ8NBT0 407 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 HDHD3Q9BSH5 251 aaPredicted RBP12.21□□□□□ -0.45
SDC1-202ENST00000381150 EGLN1Q9GZT9 426 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 C1orf123Q9NWV4 160 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 PRODH2Q9UF12 536 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 LIPGQ9Y5X9 500 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 ASXL3Q9C0F0 2248 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 SDK2Q58EX2 2172 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 IGKV3D-11A0A0A0MRZ8 115 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 TRBV6-7A0A0A0MS04 114 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 ZNF850A8MQ14 1090 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 ADAM10O14672 748 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 SOD3P08294 240 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 AFF3P51826 1226 aaKnown RBP12.21□□□□□ -0.46
SDC1-202ENST00000381150 FOXL2P58012 376 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 STARD6P59095 220 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 CFHR1Q03591 330 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 SPEM2Q0P670 501 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 KHDC3LQ587J8 217 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 TEX30Q5JUR7 227 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 ABCA7Q8IZY2 2146 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 OR5L1Q8NGL2 311 aa12.21□□□□□ -0.46
SDC1-202ENST00000381150 GTF3AQ92664 365 aaKnown RBP12.21□□□□□ -0.46
SDC1-202ENST00000381150 NXT1Q9UKK6 140 aaKnown RBP12.21□□□□□ -0.46
SDC1-202ENST00000381150 CEP192Q8TEP8 1941 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 FREM2Q5SZK8 3169 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 LMO7DNF2Z398 122 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 H3BQ15 152 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 IL33O95760 270 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 IGKV3-11P04433 115 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 SLC6A9P48067 706 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 CCL20P78556 96 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 ZNF117Q03924 483 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 PHF19Q5T6S3 580 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 TMEM123Q8N131 208 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.2□□□□□ -0.46
SDC1-202ENST00000381150 RAB39BQ96DA2 213 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 PHF7Q9BWX1 381 aaPredicted RBP12.2□□□□□ -0.46
SDC1-202ENST00000381150 CHST5Q9GZS9 411 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 SHISA8B8ZZ34 492 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 GEMIN2O14893 280 aaKnown RBP12.2□□□□□ -0.46
SDC1-202ENST00000381150 HIST1H1DP16402 221 aaKnown RBP12.2□□□□□ -0.46
SDC1-202ENST00000381150 IGFBP3P17936 291 aaPredicted RBP12.2□□□□□ -0.46
SDC1-202ENST00000381150 ZNF239Q16600 458 aaKnown RBP12.2□□□□□ -0.46
SDC1-202ENST00000381150 EMC4Q5J8M3 183 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 SLC25A24Q6NUK1 477 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 OPN5Q6U736 354 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 ZNF440Q8IYI8 595 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 ADIPOR1Q96A54 375 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 C8orf44Q96CB5 159 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 LPAR5Q9H1C0 372 aa12.2□□□□□ -0.46
SDC1-202ENST00000381150 A0A0A6YYD4 124 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 IGKV1D-43A0A0B4J1Z2 117 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 SMCO3A2RU48 225 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 TCAPO15273 167 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 DDAH2O95865 285 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 CDAP32320 146 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 PTGER4P35408 488 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 OR1D4P47884 311 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 RRADP55042 308 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 ZNF385CQ66K41 422 aaPredicted RBP12.19□□□□□ -0.46
SDC1-202ENST00000381150 SHISA6Q6ZSJ9 500 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 DTWD2Q8NBA8 298 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 Q8WTZ3 238 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 OR5B2Q96R09 309 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 PBOV1Q9GZY1 135 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 MAGT1Q9H0U3 335 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 PISDQ9UG56 409 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 HSF4Q9ULV5 492 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 COL5A1P20908 1838 aaPredicted RBP12.19□□□□□ -0.46
SDC1-202ENST00000381150 ZNF724A8MTY0 619 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 TMEM225BP0DP42 221 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 DLK1P80370 383 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 CADM4Q8NFZ8 388 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 OR2G3Q8NGZ4 309 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 ZNF721Q8TF20 911 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 OIT3Q8WWZ8 545 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 CCNL2Q96S94 520 aaPredicted RBP12.19□□□□□ -0.46
SDC1-202ENST00000381150 G6PC2Q9NQR9 355 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 DNAJB11Q9UBS4 358 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 TERTO14746 1132 aaKnown RBP12.19□□□□□ -0.46
SDC1-202ENST00000381150 FPR2P25090 351 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 NOVA1P51513 510 aaKnown RBP12.19□□□□□ -0.46
SDC1-202ENST00000381150 TMEM50BP56557 158 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 FBXW12Q6X9E4 464 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 C16orf47Q6ZP98 133 aaPredicted RBP12.19□□□□□ -0.46
SDC1-202ENST00000381150 NECAP1Q8NC96 275 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 HPSE2Q8WWQ2 592 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 DAZLQ92904 295 aaKnown RBP12.19□□□□□ -0.46
SDC1-202ENST00000381150 TSLPQ969D9 159 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 SLAMF6Q96DU3 332 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 URM1Q9BTM9 101 aaKnown RBP12.19□□□□□ -0.46
SDC1-202ENST00000381150 CUTCQ9NTM9 273 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 CA14Q9ULX7 337 aa12.19□□□□□ -0.46
SDC1-202ENST00000381150 PCNX3Q9H6A9 2034 aa12.18□□□□□ -0.46
SDC1-202ENST00000381150 TRAV36DV7A0A075B6V5 113 aa12.18□□□□□ -0.46
SDC1-202ENST00000381150 FAM157AC9JC47 383 aa12.18□□□□□ -0.46
SDC1-202ENST00000381150 LDLRAD4O15165 306 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms