RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 ZNF266Q14584 549 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 CDCP2Q5VXM1 449 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 OR13C8Q8NGS7 320 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 HGDQ93099 445 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 MPC1Q9Y5U8 109 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 ARPC4-TTLL3A0A0A6YYG9 625 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 TTRP02766 147 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 OR2B11Q5JQS5 317 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 BRICD5Q6PL45 260 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 NAA40Q86UY6 237 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 ADAT3Q96EY9 351 aaPredicted RBP10.78□□□□□ -0.68
GABPB1-203ENST00000380877 PGA4P0DJD7 388 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 PGA3P0DJD8 388 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 PMP22Q01453 160 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 ROM1Q03395 351 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 HNF4GQ14541 408 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 HIKESHIQ53FT3 197 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 ATPAF1Q5TC12 328 aaPredicted RBP10.78□□□□□ -0.68
GABPB1-203ENST00000380877 C10orf35Q96D05 121 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 GSX2Q9BZM3 304 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 ANKRD20A5PA0PJZ0 165 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 OR2F2O95006 317 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 CD1AP06126 327 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 IL3RAP26951 378 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 HOXA1P49639 335 aaPredicted RBP10.78□□□□□ -0.68
GABPB1-203ENST00000380877 OR2F1Q13607 317 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 ZNF79Q15937 498 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 C11orf91Q3C1V1 193 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 H2BFWTQ7Z2G1 175 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 RNF141Q8WVD5 230 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 RBMXL1Q96E39 390 aaKnown RBP10.78□□□□□ -0.68
GABPB1-203ENST00000380877 GALR2O43603 387 aaPredicted RBP10.78□□□□□ -0.68
GABPB1-203ENST00000380877 LRP3O75074 770 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 SLC6A1P30531 599 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 GPR12P47775 334 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 CFHR1Q03591 330 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 ACOT7LQ6ZUV0 252 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 GVQW1Q8N7I0 195 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 OR5T1Q8NG75 326 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 FAM213BQ8TBF2 198 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 MSI2Q96DH6 328 aaKnown RBP10.78□□□□□ -0.68
GABPB1-203ENST00000380877 MRPS24Q96EL2 167 aaKnown RBP10.78□□□□□ -0.68
GABPB1-203ENST00000380877 SLC7A10Q9NS82 523 aa10.78□□□□□ -0.68
GABPB1-203ENST00000380877 SPTAN1Q13813 2472 aaKnown RBP10.77□□□□□ -0.68
GABPB1-203ENST00000380877 A0A1W2PPH5 198 aa10.77□□□□□ -0.68
GABPB1-203ENST00000380877 TGM6O95932 706 aa10.77□□□□□ -0.68
GABPB1-203ENST00000380877 TNFRSF1AP19438 455 aa10.77□□□□□ -0.68
GABPB1-203ENST00000380877 RPS4XP62701 263 aaKnown RBP10.77□□□□□ -0.68
GABPB1-203ENST00000380877 CSRP2Q16527 193 aa10.77□□□□□ -0.68
GABPB1-203ENST00000380877 ZNF239Q16600 458 aaKnown RBP10.77□□□□□ -0.68
GABPB1-203ENST00000380877 TMEM108Q6UXF1 575 aa10.77□□□□□ -0.68
GABPB1-203ENST00000380877 TCTE3Q8IZS6 198 aa10.77□□□□□ -0.68
GABPB1-203ENST00000380877 ZDHHC22Q8N966 263 aa10.77□□□□□ -0.68
GABPB1-203ENST00000380877 UBALD1Q8TB05 177 aa10.77□□□□□ -0.68
GABPB1-203ENST00000380877 PPP1R1CQ8WVI7 109 aa10.77□□□□□ -0.68
GABPB1-203ENST00000380877 CYB5R1Q9UHQ9 305 aa10.77□□□□□ -0.68
GABPB1-203ENST00000380877 NOTCH4Q99466 2003 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 IGLV3-12A0A075B6K2 115 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 CTDSPLO15194 276 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 TRAF3IP2O43734 574 aaPredicted RBP10.77□□□□□ -0.69
GABPB1-203ENST00000380877 AADACP22760 399 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 LINC01590Q5TEZ4 76 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 PRAMEF5Q5TYX0 476 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 PRAMEF6Q5VXH4 476 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 WDR89Q96FK6 387 aaPredicted RBP10.77□□□□□ -0.69
GABPB1-203ENST00000380877 GMPPAQ96IJ6 420 aaPredicted RBP10.77□□□□□ -0.69
GABPB1-203ENST00000380877 HES7Q9BYE0 225 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 MRPL22Q9NWU5 206 aaKnown RBP10.77□□□□□ -0.69
GABPB1-203ENST00000380877 PEA15Q15121 130 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 ATP1A1-AS1Q5TC04 95 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 DUSP18Q8NEJ0 188 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 ZNF519Q8TB69 540 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 PGLYRP3Q96LB9 341 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 RNF150Q9ULK6 438 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 LOC101059948A0A1B0GTJ6 334 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 A0A1W2PNV4 684 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 TMEM30CPA0ZSE6 113 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 TMEM229AB2RXF0 380 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 ST3GAL2Q16842 350 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 MRPL14Q6P1L8 145 aaKnown RBP10.77□□□□□ -0.69
GABPB1-203ENST00000380877 CD200R1LQ6Q8B3 271 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 CISD2Q8N5K1 135 aaKnown RBP10.77□□□□□ -0.69
GABPB1-203ENST00000380877 EDARADDQ8WWZ3 215 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 GALMQ96C23 342 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 HIPK2Q9H2X6 1198 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 FN3KRPQ9HA64 309 aa10.77□□□□□ -0.69
GABPB1-203ENST00000380877 SOCS1O15524 211 aa10.76□□□□□ -0.69
GABPB1-203ENST00000380877 GSTZ1O43708 216 aaPredicted RBP10.76□□□□□ -0.69
GABPB1-203ENST00000380877 GMDSO60547 372 aa10.76□□□□□ -0.69
GABPB1-203ENST00000380877 SPINK2P20155 84 aa10.76□□□□□ -0.69
GABPB1-203ENST00000380877 FPR2P25090 351 aa10.76□□□□□ -0.69
GABPB1-203ENST00000380877 S100PP25815 95 aa10.76□□□□□ -0.69
GABPB1-203ENST00000380877 S100A2P29034 98 aa10.76□□□□□ -0.69
GABPB1-203ENST00000380877 SLC25A47Q6Q0C1 308 aa10.76□□□□□ -0.69
GABPB1-203ENST00000380877 C17orf82Q86X59 251 aaPredicted RBP10.76□□□□□ -0.69
GABPB1-203ENST00000380877 C2orf50Q96LR7 162 aa10.76□□□□□ -0.69
GABPB1-203ENST00000380877 TMEM68Q96MH6 324 aa10.76□□□□□ -0.69
GABPB1-203ENST00000380877 CHST5Q9GZS9 411 aa10.76□□□□□ -0.69
GABPB1-203ENST00000380877 GCM1Q9NP62 436 aa10.76□□□□□ -0.69
GABPB1-203ENST00000380877 LIN7CQ9NUP9 197 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms