RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 CMBLQ96DG6 245 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 SOX7Q9BT81 388 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 MS4A7Q9GZW8 240 aaPredicted RBP6.71□□□□□ -1.34
CDKL5-202ENST00000379996 PBOV1Q9GZY1 135 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 CST11Q9H112 138 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 EXO5Q9H790 373 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 RDH8Q9NYR8 311 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 ZNF224Q9NZL3 707 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 FLVCR1Q9Y5Y0 555 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 UBE2QL1A1L167 161 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 P2RY10O00398 339 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 CXCL13O43927 109 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 RAD51DO75771 328 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 OR6A2O95222 327 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 UBBP0CG47 229 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 ZNF121P58317 390 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-202ENST00000379996 RPS27AP62979 156 aaKnown RBP6.7□□□□□ -1.34
CDKL5-202ENST00000379996 UBA52P62987 128 aaKnown RBP6.7□□□□□ -1.34
CDKL5-202ENST00000379996 HIST1H3AP68431 136 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 PPP1R1AQ13522 171 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 HIST2H3PS2Q5TEC6 136 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 TMEM244Q5VVB8 128 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 HIST2H3AQ71DI3 136 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 C20orf196Q8IYI0 205 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 FAM89BQ8N5H3 189 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 GVQW1Q8N7I0 195 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 OR1M1Q8NGA1 313 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 OR8S1Q8NH09 359 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 SNRNP40Q96DI7 357 aaKnown RBP6.7□□□□□ -1.34
CDKL5-202ENST00000379996 SLAMF6Q96DU3 332 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 PHYHIPLQ96FC7 376 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 CYTL1Q9NRR1 136 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 MED29Q9NX70 200 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 IGKV1-9A0A0C4DH69 117 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 OR5H14A6NHG9 310 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 DNASE2O00115 360 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-202ENST00000379996 IL18BPO95998 194 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 STARP49675 285 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 CAPZA1P52907 286 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 MEF2DQ14814 521 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 PNLIPRP3Q17RR3 467 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 TMEM177Q53S58 311 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 THEM4Q5T1C6 240 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 ATRAIDQ6UW56 229 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 OR2W3Q7Z3T1 314 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 ADAD2Q8NCV1 583 aaKnown RBP6.7□□□□□ -1.34
CDKL5-202ENST00000379996 NOXO1Q8NFA2 376 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 PPP1R35Q8TAP8 253 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 FBXW5Q969U6 566 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 ARL6Q9H0F7 186 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 TMEM269A0A1B0GVZ9 245 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 ZNF736B4DX44 427 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-202ENST00000379996 NPIPA5E9PKD4 350 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 MFNGO00587 321 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 OR2F2O95006 317 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 AMY2AP04746 511 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 TBPP20226 339 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 BDKRB2P30411 391 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 CEACAM8P31997 349 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-202ENST00000379996 TMEM50BP56557 158 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 SUPT4H1P63272 117 aaKnown RBP6.7□□□□□ -1.34
CDKL5-202ENST00000379996 OR2F1Q13607 317 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 VAX1Q5SQQ9 334 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 C1orf185Q5T7R7 199 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 PXDC1Q5TGL8 231 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 BPIFB2Q8N4F0 458 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 LYZL4Q96KX0 146 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 MDFIQ99750 246 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 NICN1Q9BSH3 213 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 TMEM185BQ9H7F4 350 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 PARPBPQ9NWS1 579 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 UPB1Q9UBR1 384 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 NPIPA1Q9UND3 350 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 SPEF1Q9Y4P9 236 aa6.7□□□□□ -1.34
CDKL5-202ENST00000379996 FXYD6-FXYD2A0A087WZ82 144 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 A0A0D9SG52 128 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 C5orf63A6NC05 138 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 SLC22A20A6NK97 555 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 MPTX1A8MV57 137 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 LGALS8O00214 317 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 ZNF43P17038 809 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 KLK2P20151 261 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 ATP1B3P54709 279 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 SRSF2Q01130 221 aaKnown RBP6.69□□□□□ -1.34
CDKL5-202ENST00000379996 RSPO1Q2MKA7 263 aaPredicted RBP6.69□□□□□ -1.34
CDKL5-202ENST00000379996 OR52W1Q6IF63 320 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 RAB12Q6IQ22 244 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 CCDC107Q8WV48 283 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 DACT3Q96B18 629 aaPredicted RBP6.69□□□□□ -1.34
CDKL5-202ENST00000379996 RNF126Q9BV68 326 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 MFFQ9GZY8 342 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 FXYD6Q9H0Q3 95 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 MOB1AQ9H8S9 216 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 ZMAT3Q9HA38 289 aaKnown RBP6.69□□□□□ -1.34
CDKL5-202ENST00000379996 ZNF71Q9NQZ8 489 aaPredicted RBP6.69□□□□□ -1.34
CDKL5-202ENST00000379996 CKLFQ9UBR5 152 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 IGHG1P01857 330 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 HLA-DQA2P01906 255 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 RLN1P04808 185 aa6.69□□□□□ -1.34
CDKL5-202ENST00000379996 CD2P06729 351 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms