RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SMIM21Q3B7S5 101 aa14.32□□□□□ -0.12
PDLIM4-202ENST00000379018 PLCXD3Q63HM9 321 aa14.32□□□□□ -0.12
PDLIM4-202ENST00000379018 WIPF2Q8TF74 440 aaPredicted RBP14.32□□□□□ -0.12
PDLIM4-202ENST00000379018 FOXRED1Q96CU9 486 aaPredicted RBP14.32□□□□□ -0.12
PDLIM4-202ENST00000379018 CMTM5Q96DZ9 223 aa14.32□□□□□ -0.12
PDLIM4-202ENST00000379018 WNT10AQ9GZT5 417 aa14.32□□□□□ -0.12
PDLIM4-202ENST00000379018 MUC13Q9H3R2 512 aa14.32□□□□□ -0.12
PDLIM4-202ENST00000379018 PITPNC1Q9UKF7 332 aa14.32□□□□□ -0.12
PDLIM4-202ENST00000379018 VGLL3A8MV65 326 aa14.31□□□□□ -0.12
PDLIM4-202ENST00000379018 KRT36O76013 467 aa14.31□□□□□ -0.12
PDLIM4-202ENST00000379018 HOXD3P31249 432 aaPredicted RBP14.31□□□□□ -0.12
PDLIM4-202ENST00000379018 PRDX2P32119 198 aa14.31□□□□□ -0.12
PDLIM4-202ENST00000379018 PSMA6P60900 246 aaKnown RBP14.31□□□□□ -0.12
PDLIM4-202ENST00000379018 CEACAM21Q3KPI0 293 aa14.31□□□□□ -0.12
PDLIM4-202ENST00000379018 ZNF561Q8N587 486 aa14.31□□□□□ -0.12
PDLIM4-202ENST00000379018 NIPAL2Q9H841 368 aa14.31□□□□□ -0.12
PDLIM4-202ENST00000379018 KLHDC2Q9Y2U9 406 aa14.31□□□□□ -0.12
PDLIM4-202ENST00000379018 HILPDAQ9Y5L2 63 aa14.31□□□□□ -0.12
PDLIM4-202ENST00000379018 U3KQV3 271 aa14.31□□□□□ -0.12
PDLIM4-202ENST00000379018 TCRBV4S1A1TA0A5B7 111 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 ERICH4A6NGS2 130 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 SYNGR1O43759 233 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 ALDOBP05062 364 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 MAP2K3P46734 347 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 SLC34A1Q06495 639 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 LDLRAD2Q5SZI1 272 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 ZNF770Q6IQ21 691 aaPredicted RBP14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 WFDC9Q8NEX5 89 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 OR13D1Q8NGV5 346 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 TEX47Q8TBZ9 253 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 CMC2Q9NRP2 79 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 TBL2Q9Y4P3 447 aaKnown RBP14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 LRP12Q9Y561 859 aa14.3□□□□□ -0.12
PDLIM4-202ENST00000379018 FAM90A8PA6NJQ4 464 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 PSMD9O00233 223 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 EBAG9O00559 213 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 NXPH2O95156 264 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 EDDM3BP56851 147 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 CYP2R1Q6VVX0 501 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 KRT77Q7Z794 578 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 CENPVQ7Z7K6 275 aaPredicted RBP14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 ASCC1Q8N9N2 400 aaKnown RBP14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 POC1AQ8NBT0 407 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 OTOSQ8NHW6 89 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 NDNFQ8TB73 568 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 MALSU1Q96EH3 234 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 WWC2-AS2Q96NR7 200 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 RASL12Q9NYN1 266 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 PIGLQ9Y2B2 252 aa14.29□□□□□ -0.12
PDLIM4-202ENST00000379018 OR5B21A6NL26 309 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 ODF3BA8MYP8 253 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 H3BN98 237 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 GSC2O15499 205 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 HSD17B1P14061 328 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 HAAOP46952 286 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 OR12D2P58182 307 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 CD83Q01151 205 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 PLBD1Q6P4A8 553 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 CDRT15Q96T59 188 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 TTTY10Q9BZA0 68 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 VNN3Q9NY84 501 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 TENM3Q9P273 2699 aa14.28□□□□□ -0.12
PDLIM4-202ENST00000379018 TK1P04183 234 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 HMGA2P52926 109 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 HCCSP53701 268 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 DLX6P56179 175 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 RPS7P62081 194 aaKnown RBP14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 ESRRGP62508 458 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 ZNF626Q68DY1 528 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 ZNF454Q8N9F8 522 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 OR5A2Q8NGI9 324 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 OR51E1Q8TCB6 317 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 MYDGFQ969H8 173 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 RCC1LQ96I51 464 aaKnown RBP14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 OR8B4Q96RC9 309 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 OCSTAMPQ9BR26 566 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 GPR84Q9NQS5 396 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 GPR173Q9NS66 373 aa14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 SAMHD1Q9Y3Z3 626 aaKnown RBP14.27□□□□□ -0.13
PDLIM4-202ENST00000379018 C17orf98A8MV24 154 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 PRR23D1E9PI22 279 aaPredicted RBP14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 CLIC3O95833 236 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 PGA5P0DJD9 388 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 PRR23D2P0DMB1 279 aaPredicted RBP14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 RIPPLY1Q0D2K3 151 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 TCTEX1D4Q5JR98 221 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 ZNF684Q5T5D7 378 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 ASRGL1Q7L266 308 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 NIPSNAP1Q9BPW8 284 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 MYLK2Q9H1R3 596 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 ENPP5Q9UJA9 477 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 LAMP5Q9UJQ1 280 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 GTF2A1LQ9UNN4 478 aa14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 TSSC4Q9Y5U2 329 aaPredicted RBP14.26□□□□□ -0.13
PDLIM4-202ENST00000379018 DNAH9Q9NYC9 4486 aa14.25□□□□□ -0.13
PDLIM4-202ENST00000379018 TMEM269A0A1B0GVZ9 245 aa14.25□□□□□ -0.13
PDLIM4-202ENST00000379018 SH2D7A6NKC9 451 aaPredicted RBP14.25□□□□□ -0.13
PDLIM4-202ENST00000379018 E9PQ18 207 aa14.25□□□□□ -0.13
PDLIM4-202ENST00000379018 J3QT63 122 aa14.25□□□□□ -0.13
PDLIM4-202ENST00000379018 INMTO95050 263 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms