RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 ISG20L2Q9H9L3 353 aaKnown RBP12.68□□□□□ -0.38
RAB4B-202ENST00000378307 ELL3Q9HB65 397 aaPredicted RBP12.68□□□□□ -0.38
RAB4B-202ENST00000378307 TMEM89A2RUT3 159 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 F8VVB4 439 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 F8VWA3 439 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 J3QT63 122 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 SIGLEC5O15389 551 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 SLC16A6O15403 523 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 CLIC3O95833 236 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 GABRA2P47869 451 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 CEBPDP49716 269 aaPredicted RBP12.67□□□□□ -0.38
RAB4B-202ENST00000378307 IL13RA1P78552 427 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 BAMBIQ13145 260 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 SMN1Q16637 294 aaKnown RBP12.67□□□□□ -0.38
RAB4B-202ENST00000378307 LRRC36Q1X8D7 754 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 LPCAT4Q643R3 524 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 ZNF573Q86YE8 665 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 PDZD9Q8IXQ8 264 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 CD177Q8N6Q3 437 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 Q8N7P7 452 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 OR10AC1Q8NH08 325 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 PELI1Q96FA3 418 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 C4orf36Q96KX1 117 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 DNTTIP1Q9H147 329 aa12.67□□□□□ -0.38
RAB4B-202ENST00000378307 SLC25A10Q9UBX3 287 aaPredicted RBP12.67□□□□□ -0.38
RAB4B-202ENST00000378307 FAM230AA0A1W2PPH8 454 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 RFPL4AA6NLU0 287 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 RFPL4AL1F8VTS6 287 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 J3QLW9 94 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 NOS1APO75052 506 aaPredicted RBP12.66□□□□□ -0.38
RAB4B-202ENST00000378307 WBP4O75554 376 aaKnown RBP12.66□□□□□ -0.38
RAB4B-202ENST00000378307 ZNF19P17023 458 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 PRTN3P24158 256 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 MPZP25189 248 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 ACTG1P63261 375 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 ACTC1P68032 377 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 ACTA1P68133 377 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 SLC9A3R2Q15599 337 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 ZSCAN26Q16670 478 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 C11orf91Q3C1V1 193 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 LRRC10Q5BKY1 277 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 METTL11BQ5VVY1 283 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 FDX2Q6P4F2 183 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 RBMS3Q6XE24 437 aaKnown RBP12.66□□□□□ -0.38
RAB4B-202ENST00000378307 RNF144BQ7Z419 303 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 FAM220AQ7Z4H9 259 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 VMO1Q7Z5L0 202 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 OR51A4Q8NGJ6 313 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 OR52I1Q8NGK6 324 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 C8orf46Q8TAG6 207 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 H1FXQ92522 213 aaKnown RBP12.66□□□□□ -0.38
RAB4B-202ENST00000378307 LHX4Q969G2 390 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 ADAT3Q96EY9 351 aaPredicted RBP12.66□□□□□ -0.38
RAB4B-202ENST00000378307 MED30Q96HR3 178 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 CHST5Q9GZS9 411 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 ONECUT1Q9UBC0 465 aa12.66□□□□□ -0.38
RAB4B-202ENST00000378307 IGKV1-9A0A0C4DH69 117 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 NKX6-3A6NJ46 265 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 OR4C45A6NMZ5 311 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 E9PI62 339 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 INMTO95050 263 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 IGHA1P01876 353 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 UBCP0CG48 685 aaKnown RBP12.65□□□□□ -0.38
RAB4B-202ENST00000378307 NDUFB7P17568 137 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 ERVK11-1P61568 191 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 GALEQ14376 348 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 GPR157Q5UAW9 335 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 KCTD20Q7Z5Y7 419 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 STMN2Q93045 179 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 SDSLQ96GA7 329 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 NRIP2Q9BQI9 281 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 ADI1Q9BV57 179 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 ALG8Q9BVK2 526 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 PRDM13Q9H4Q3 707 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 PLEKHA1Q9HB21 404 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 HES4Q9HCC6 221 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 MRPS18AQ9NVS2 196 aaKnown RBP12.65□□□□□ -0.38
RAB4B-202ENST00000378307 SMPD3Q9NY59 655 aaPredicted RBP12.65□□□□□ -0.38
RAB4B-202ENST00000378307 RASL12Q9NYN1 266 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 MTCH1Q9NZJ7 389 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 KPTNQ9Y664 436 aa12.65□□□□□ -0.38
RAB4B-202ENST00000378307 IGHV1-69DA0A0B4J2H0 117 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 GPR37O15354 613 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 MPZL2O60487 215 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 IGHV1-69P01742 117 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 ISG15P05161 165 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 HTR1AP08908 422 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 PEX2P28328 305 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 PRDX2P32119 198 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 COMPP49747 757 aaPredicted RBP12.64□□□□□ -0.39
RAB4B-202ENST00000378307 CAV3P56539 151 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 TMEM244Q5VVB8 128 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 TMEM185AQ8NFB2 350 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 GCDHQ92947 438 aaPredicted RBP12.64□□□□□ -0.39
RAB4B-202ENST00000378307 FGGYQ96C11 551 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 Q96MT0 163 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 PKIBQ9C010 78 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 SIRT7Q9NRC8 400 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 ERVK13-1Q9NX77 482 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms