RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 SPINK2P20155 84 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 OPRM1P35372 400 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 PPIAP62937 165 aaKnown RBP16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 ACTBL2Q562R1 376 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 CDC6Q99741 560 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 TMA7Q9Y2S6 64 aaKnown RBP16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 AUP1Q9Y679 476 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 SERPINE3A8MV23 424 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 GEMIN2O14893 280 aaKnown RBP16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 KNG1P01042 644 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 CD79AP11912 226 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 TMEM128Q5BJH2 165 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 ZNF660Q6AZW8 331 aaPredicted RBP16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 CLEC18BQ6UXF7 455 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 TMPRSS7Q7RTY8 843 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 OR5AP2Q8NGF4 316 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 DMRTA2Q96SC8 542 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 C12orf49Q9H741 205 aa16.68■□□□□ 0.26
PCDHA4-201ENST00000378125 CFAP47Q6ZTR5 3102 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 IGKV3D-15A0A087WSY6 115 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 C5orf49A4QMS7 147 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 FIGNL2A6NMB9 653 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 ZNF850A8MQ14 1090 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 RLN2P04090 185 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 SFTPBP07988 381 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 PRKACBP22694 351 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 MPGP29372 298 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 FGL1Q08830 312 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 TRIP6Q15654 476 aaKnown RBP16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 LPCAT3Q6P1A2 487 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 FAHD2BQ6P2I3 314 aaPredicted RBP16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 CCDC54Q8NEL0 328 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 EMG1Q92979 244 aaKnown RBP16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 FAHD2AQ96GK7 314 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 AK3Q9UIJ7 227 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 GPR160Q9UJ42 338 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 MPTX1A8MV57 137 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 LINC01387J3KSC0 135 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 RRASP10301 218 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 IKZF1Q13422 519 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 AANATQ16613 207 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 RPUSD3Q6P087 351 aaKnown RBP16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 NUFIP2Q7Z417 695 aaKnown RBP16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 TMEM17Q86X19 198 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 ZSCAN4Q8NAM6 433 aaPredicted RBP16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 RELL2Q8NC24 303 aaPredicted RBP16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 DOCK7Q96N67 2140 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 VRK1Q99986 396 aaPredicted RBP16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 WDR13Q9H1Z4 485 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 CRIM1Q9NZV1 1036 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 OSGIN2Q9Y236 505 aa16.67■□□□□ 0.26
PCDHA4-201ENST00000378125 TAS2R31P59538 309 aa16.66■□□□□ 0.26
PCDHA4-201ENST00000378125 TAS2R46P59540 309 aa16.66■□□□□ 0.26
PCDHA4-201ENST00000378125 SUPT4H1P63272 117 aaKnown RBP16.66■□□□□ 0.26
PCDHA4-201ENST00000378125 SRSF6Q13247 344 aaKnown RBP16.66■□□□□ 0.26
PCDHA4-201ENST00000378125 LHFPL2Q6ZUX7 228 aa16.66■□□□□ 0.26
PCDHA4-201ENST00000378125 OVCH2Q7RTZ1 564 aa16.66■□□□□ 0.26
PCDHA4-201ENST00000378125 CALHM1Q8IU99 346 aa16.66■□□□□ 0.26
PCDHA4-201ENST00000378125 FBXL14Q8N1E6 418 aa16.66■□□□□ 0.26
PCDHA4-201ENST00000378125 ASB13Q8WXK3 278 aa16.66■□□□□ 0.26
PCDHA4-201ENST00000378125 SULT4A1Q9BR01 284 aa16.66■□□□□ 0.26
PCDHA4-201ENST00000378125 CSAG2Q9Y5P2 127 aa16.66■□□□□ 0.26
PCDHA4-201ENST00000378125 PDGFAP04085 211 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 PGAM2P15259 253 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 FPR2P25090 351 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 ARPC4P59998 168 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 ANKRD55Q3KP44 614 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 LHFPL1Q86WI0 220 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 FER1L6-AS2Q96M78 137 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 ZNF2Q9BSG1 426 aaPredicted RBP16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 LDAHQ9H6V9 325 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 RYDENQ9NUL5 291 aaKnown RBP16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 PARPBPQ9NWS1 579 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 MBD2Q9UBB5 411 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 ZNF629Q9UEG4 869 aaPredicted RBP16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 TNFSF18Q9UNG2 199 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 SLC7A11Q9UPY5 501 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 SPENQ96T58 3664 aaKnown RBP16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 SCO1O75880 301 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 NMBP08949 121 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 AGTR1P30556 359 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 SRSF4Q08170 494 aaKnown RBP16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 FAM74A1Q5RGS3 127 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 C1QTNF12Q5T7M4 302 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 TMEM42Q69YG0 159 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 OR51F2Q8NH61 342 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 SCARB1Q8WTV0 552 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 APH1AQ96BI3 265 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 OR51B6Q9H340 312 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 CACNA1HO95180 2353 aa16.65■□□□□ 0.26
PCDHA4-201ENST00000378125 NME2P1O60361 137 aa16.64■□□□□ 0.25
PCDHA4-201ENST00000378125 B3GALNT1O75752 331 aa16.64■□□□□ 0.25
PCDHA4-201ENST00000378125 SFT2D2O95562 160 aa16.64■□□□□ 0.25
PCDHA4-201ENST00000378125 NME2P22392 152 aa16.64■□□□□ 0.25
PCDHA4-201ENST00000378125 VASH2Q86V25 355 aa16.64■□□□□ 0.25
PCDHA4-201ENST00000378125 MCEMP1Q8IX19 187 aa16.64■□□□□ 0.25
PCDHA4-201ENST00000378125 ZNF100Q8IYN0 542 aa16.64■□□□□ 0.25
PCDHA4-201ENST00000378125 OR6K3Q8NGY3 331 aa16.64■□□□□ 0.25
PCDHA4-201ENST00000378125 THAP6Q8TBB0 222 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms