RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 CCL2P13500 99 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 SRP14P37108 136 aaKnown RBP15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 PXDC1Q5TGL8 231 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 C15orf54Q8N8G6 183 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 OR5D13Q8NGL4 314 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 LRRC29Q8WV35 223 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 ZNF75AQ96N20 296 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 GINS3Q9BRX5 216 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 M6PRP20645 277 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 C3AR1Q16581 482 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 OR5V1Q9UGF6 321 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 NUP214P35658 2090 aaPredicted RBP15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 ATP6V1G2-DDX39BF2Z307 99 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 FPR2P25090 351 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 TCTE3Q8IZS6 198 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 PTP4A1Q93096 173 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 TRMT61AQ96FX7 289 aaKnown RBP15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 ACKR3P25106 362 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 TAS2R45P59539 299 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 OR52N4Q8NGI2 321 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 OGG1O15527 345 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 IL5P05113 134 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 IFI6P09912 130 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 ZDHHC22Q8N966 263 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 OR8U1Q8NH10 309 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 RAB1BQ9H0U4 201 aa15.84■□□□□ 0.13
CLSTN1-202ENST00000377298 PCMT1P22061 227 aa15.83■□□□□ 0.13
CLSTN1-202ENST00000377298 ACAA2P42765 397 aaKnown RBP15.83■□□□□ 0.13
CLSTN1-202ENST00000377298 SNTB1Q13884 538 aaKnown RBP15.83■□□□□ 0.13
CLSTN1-202ENST00000377298 GPR35Q9HC97 309 aa15.83■□□□□ 0.13
CLSTN1-202ENST00000377298 PSENENQ9NZ42 101 aa15.83■□□□□ 0.13
CLSTN1-202ENST00000377298 MTFP1Q9UDX5 166 aa15.83■□□□□ 0.13
CLSTN1-202ENST00000377298 HIST2H3PS2Q5TEC6 136 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 ZNF680Q8NEM1 530 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 CCL17Q92583 94 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 ZNF251Q9BRH9 671 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 TINAGL1Q9GZM7 467 aaPredicted RBP15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 SEC16AO15027 2179 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 IGFBP7Q16270 282 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 VMA21Q3ZAQ7 101 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 SLC23A3Q6PIS1 610 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 GLCCI1Q86VQ1 547 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 CDH26Q8IXH8 852 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 TGIF2Q9GZN2 237 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 ZFP92A6NM28 416 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 CDC14BO60729 498 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 CTAG2O75638 210 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 IGHA1P01876 353 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 NPBWR1P48145 328 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 HABP2Q14520 560 aaPredicted RBP15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 FAM181AQ8N9Y4 354 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 ABHD3Q8WU67 409 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 GMPPAQ96IJ6 420 aaPredicted RBP15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 TRIOBPQ9H2D6 2365 aa15.83■□□□□ 0.12
CLSTN1-202ENST00000377298 RPS10-NUDT3A0A1W2PQS6 291 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 A0A1W2PR77 199 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 RPS10P46783 165 aaKnown RBP15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 INSL4Q14641 139 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 TMEM182Q6ZP80 229 aaPredicted RBP15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 UCN2Q96RP3 112 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 TTTY12Q9BZ98 90 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 PIGMQ9H3S5 423 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 M0R1X1 148 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 TXNL1O43396 289 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 AGFG2O95081 481 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 IAPPP10997 89 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 CD96P40200 585 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 UBAC2Q8NBM4 344 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 CNTD2Q9H8S5 307 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 IGHV1-45A0A0A0MS14 117 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 OR3A4PP47883 348 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 PLA1AQ53H76 456 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 DGAT2L6Q6ZPD8 337 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 HSBP1L1C9JCN9 74 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 PDGFBP01127 241 aaPredicted RBP15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 MBP02144 154 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 MOB3BQ86TA1 216 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 GAL3ST2Q9H3Q3 398 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 ONECUT1Q9UBC0 465 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 AK3Q9UIJ7 227 aa15.82■□□□□ 0.12
CLSTN1-202ENST00000377298 NUDT19A8MXV4 375 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 SSX4O60224 188 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 PDCD1Q15116 288 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 PLPPR5Q32ZL2 321 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 PRDM6Q9NQX0 595 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 hADV38S2A0JD32 116 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 RAB4AP20338 218 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 CSN1S1P47710 185 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 ZFP82Q8N141 532 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 RAB1CQ92928 201 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 FAAP24Q9BTP7 215 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 NTMQ9P121 344 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 TO15178 435 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 RAB7AP51149 207 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 CD300CQ08708 224 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 ZNF816Q0VGE8 651 aaPredicted RBP15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 ACOT6Q3I5F7 207 aaPredicted RBP15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 OR2H1Q9GZK4 316 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 PYCARD-AS1I3L0S3 204 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms