RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 NKPD1Q17RQ9 610 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 OR2T2Q6IF00 324 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 CALHM1Q8IU99 346 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 FAM89BQ8N5H3 189 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 OR51F2Q8NH61 342 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 DEDD2Q8WXF8 326 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 TECTBQ96PL2 329 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 MED28Q9H204 178 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 OR51J1Q9H342 316 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 GHITMQ9H3K2 345 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 PLSCR3Q9NRY6 295 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 SPEF1Q9Y4P9 236 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 IGKV1-12A0A0C4DH73 117 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 B8ZZF3 427 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 LILRA1O75019 489 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 IGKV1D-12P01611 117 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 GSTP1P09211 210 aaKnown RBP11.12□□□□□ -0.63
TRIM40-206ENST00000376724 CPT2P23786 658 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 RAD52P43351 418 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 TMPRSS3P57727 454 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 ERVS71-1P61550 626 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 RBMS2Q15434 407 aaKnown RBP11.12□□□□□ -0.63
TRIM40-206ENST00000376724 ST3GAL2Q16842 350 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 SCGB2B2Q4G0G5 96 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 NKAPLQ5M9Q1 402 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 ALKBH2Q6NS38 261 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 IDO2Q6ZQW0 420 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 ZDHHC23Q8IYP9 409 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 FTMTQ8N4E7 242 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 WDR31Q8NA23 367 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 Q8NA96 180 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 CSNK2A3Q8NEV1 391 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 FAM57AQ8TBR7 257 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 GON7Q9BXV9 100 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 OPA3Q9H6K4 179 aa11.12□□□□□ -0.63
TRIM40-206ENST00000376724 C7orf66A4D0T2 115 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 ANKRD30BLA7E2S9 258 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 PYCARD-AS1I3L0S3 204 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 MFNGO00587 321 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 HPXP02790 462 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 RLN1P04808 185 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 SFTPBP07988 381 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 HAAOP46952 286 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 OR3A3P47888 321 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 RAG2P55895 527 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 FCN2Q15485 313 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 TAF9Q16594 264 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 SLC25A26Q70HW3 274 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 C6orf201Q7Z4U5 140 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 NOXA1Q86UR1 476 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 SLC51BQ86UW2 128 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 BPIFB2Q8N4F0 458 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF611Q8N823 705 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 HPSE2Q8WWQ2 592 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 Q96M66 194 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 TM2D1Q9BX74 207 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 PECRQ9BY49 303 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 OR2J1Q9GZK6 312 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 BSNQ9UPA5 3926 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 CACNA1GO43497 2377 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF732B4DXR9 585 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 SHOXO15266 292 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 SSNA1O43805 119 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 SMPD2O60906 423 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 CST4P01036 141 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 CBR1P16152 277 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 PTGER4P35408 488 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 PPP1CBP62140 327 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 CEACAM21Q3KPI0 293 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 PIGYQ3MUY2 71 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 Q5BKY6 102 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF324BQ6AW86 544 aaPredicted RBP11.11□□□□□ -0.63
TRIM40-206ENST00000376724 BEND4Q6ZU67 534 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 BHLHA15Q7RTS1 189 aaPredicted RBP11.11□□□□□ -0.63
TRIM40-206ENST00000376724 C1orf162Q8NEQ5 155 aaPredicted RBP11.11□□□□□ -0.63
TRIM40-206ENST00000376724 RADILQ96JH8 1075 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 HIST1H2AAQ96QV6 131 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 SEC22CQ9BRL7 303 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 FGF23Q9GZV9 251 aaPredicted RBP11.11□□□□□ -0.63
TRIM40-206ENST00000376724 PLEKHJ1Q9NW61 149 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF581Q9P0T4 197 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 SH3BGRL2Q9UJC5 107 aa11.11□□□□□ -0.63
TRIM40-206ENST00000376724 INTS1Q8N201 2190 aaKnown RBP11.11□□□□□ -0.63
TRIM40-206ENST00000376724 PQLC2LA1A4F0 135 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 FOXI3A8MTJ6 420 aaPredicted RBP11.1□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF780AO75290 641 aaPredicted RBP11.1□□□□□ -0.63
TRIM40-206ENST00000376724 PMP2P02689 132 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 CD74P04233 296 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 HOXB1P14653 301 aaPredicted RBP11.1□□□□□ -0.63
TRIM40-206ENST00000376724 CA6P23280 308 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 HRH1P35367 487 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 PDCD1Q15116 288 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 PNLIPRP3Q17RR3 467 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 RNASE10Q5GAN6 216 aaKnown RBP11.1□□□□□ -0.63
TRIM40-206ENST00000376724 FBXL14Q8N1E6 418 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 OSR2Q8N2R0 312 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 OR1J1Q8NGS3 322 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 SLC6A7Q99884 636 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 ST6GALNAC5Q9BVH7 336 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 ING3Q9NXR8 418 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms