RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 HFEQ30201 348 aa12.71□□□□□ -0.38
MSH5-201ENST00000375703 ZNF837Q96EG3 531 aaPredicted RBP12.71□□□□□ -0.38
MSH5-201ENST00000375703 CPNE2Q96FN4 548 aaPredicted RBP12.71□□□□□ -0.38
MSH5-201ENST00000375703 ANGPTL4Q9BY76 406 aa12.71□□□□□ -0.38
MSH5-201ENST00000375703 METTL9Q9H1A3 318 aa12.71□□□□□ -0.38
MSH5-201ENST00000375703 ANXA10Q9UJ72 324 aa12.71□□□□□ -0.38
MSH5-201ENST00000375703 K7EPK0 472 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 CST4P01036 141 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 LIFP15018 202 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 MUC1P15941 1255 aaPredicted RBP12.7□□□□□ -0.38
MSH5-201ENST00000375703 LPAR6P43657 344 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 RRADP55042 308 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 B2MP61769 119 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 MAML2Q8IZL2 1156 aaPredicted RBP12.7□□□□□ -0.38
MSH5-201ENST00000375703 LINC00518Q8N0U6 118 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 FAM71E2Q8N5Q1 922 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 ZIC4Q8N9L1 334 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 INTS12Q96CB8 462 aaKnown RBP12.7□□□□□ -0.38
MSH5-201ENST00000375703 NRIP2Q9BQI9 281 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 DKKL1Q9UK85 242 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 PADI1Q9ULC6 663 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 NCOA6Q14686 2063 aaPredicted RBP12.7□□□□□ -0.38
MSH5-201ENST00000375703 LOC102723996A0A087X1L8 192 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 FAM230AA0A1W2PPH8 454 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 RNASEK-C17orf49H0YIS7 233 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 ANGPTL7O43827 346 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 FBXO24O75426 580 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 FARS2O95363 451 aaKnown RBP12.7□□□□□ -0.38
MSH5-201ENST00000375703 OR5H8P0DN80 308 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 RSU1Q15404 277 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 TAF9Q16594 264 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 PROK2Q9HC23 129 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 FSCN3Q9NQT6 498 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 RCC2Q9P258 522 aaKnown RBP12.7□□□□□ -0.38
MSH5-201ENST00000375703 FOXD3Q9UJU5 478 aaPredicted RBP12.7□□□□□ -0.38
MSH5-201ENST00000375703 EDARQ9UNE0 448 aa12.7□□□□□ -0.38
MSH5-201ENST00000375703 IGHV1-45A0A0A0MS14 117 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 CRYM-AS1A6NIL9 109 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 K7ESF4 209 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 TNFSF11O14788 317 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 SPRY1O43609 319 aaPredicted RBP12.69□□□□□ -0.38
MSH5-201ENST00000375703 CYC1P08574 325 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 ACKR3P25106 362 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 FCGR2CP31995 323 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 SULT1A2P50226 295 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 FAM27BQ5VT28 67 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 GGNBP1Q5YKI7 109 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 PLXDC2Q6UX71 529 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 OR2AE1Q8NHA4 323 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 SAP25Q8TEE9 199 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 WDR54Q9H977 334 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 WNT16Q9UBV4 365 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 LSM5Q9Y4Y9 91 aaKnown RBP12.69□□□□□ -0.38
MSH5-201ENST00000375703 A0A0J9YW62 118 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 ZNF850A8MQ14 1090 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 DEDDO75618 318 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 RAB11FIP2Q7L804 512 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 MRPL24Q96A35 216 aaKnown RBP12.69□□□□□ -0.38
MSH5-201ENST00000375703 PRRX2Q99811 253 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 TUBD1Q9UJT1 453 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 NXT1Q9UKK6 140 aaKnown RBP12.69□□□□□ -0.38
MSH5-201ENST00000375703 KCNIP3Q9Y2W7 256 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 PTRH2Q9Y3E5 179 aaKnown RBP12.69□□□□□ -0.38
MSH5-201ENST00000375703 ZNF175Q9Y473 711 aa12.69□□□□□ -0.38
MSH5-201ENST00000375703 RTTNQ86VV8 2226 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 JTBO76095 146 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 OPRM1P35372 400 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 SUCLG1P53597 346 aaKnown RBP12.68□□□□□ -0.38
MSH5-201ENST00000375703 TMEM33P57088 247 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 MRPS34P82930 218 aaKnown RBP12.68□□□□□ -0.38
MSH5-201ENST00000375703 C20orf196Q8IYI0 205 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 TMEM156Q8N614 296 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 SPSB1Q96BD6 273 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 REEP6Q96HR9 211 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 IMMP1LQ96LU5 166 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 CMSS1Q9BQ75 279 aaKnown RBP12.68□□□□□ -0.38
MSH5-201ENST00000375703 DECR2Q9NUI1 292 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 AK3Q9UIJ7 227 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 EML6Q6ZMW3 1958 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 AGPAT2O15120 278 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 SGCEO43556 437 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 KLK3P07288 261 aaPredicted RBP12.68□□□□□ -0.38
MSH5-201ENST00000375703 FGF5P12034 268 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 SSR4P51571 173 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 PIGPP57054 158 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 RAC1P63000 192 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 BTNL8Q6UX41 500 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 SMIM3Q9BZL3 60 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 LIME1Q9H400 295 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 ZFP57Q9NU63 452 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 NECAP2Q9NVZ3 263 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 FBXL17Q9UF56 701 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 SCGB1D2O95969 90 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 UMODP07911 640 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 EXT1Q16394 746 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 IGSF11Q5DX21 431 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 FAM76BQ5HYJ3 339 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 TMEM268Q5VZI3 342 aa12.68□□□□□ -0.38
MSH5-201ENST00000375703 LYSMD4Q5XG99 296 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms