RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 GMDSO60547 372 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 MRPS14O60783 128 aaKnown RBP10.12□□□□□ -0.79
LSM2-208ENST00000375661 MTRF1O75570 445 aaKnown RBP10.12□□□□□ -0.79
LSM2-208ENST00000375661 WNT2P09544 360 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 FAHP16930 419 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 CD80P33681 288 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 RBMXP38159 391 aaKnown RBP10.12□□□□□ -0.79
LSM2-208ENST00000375661 CD200P41217 278 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 BPIFB3P59826 476 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 SEC61A1P61619 476 aaKnown RBP10.12□□□□□ -0.79
LSM2-208ENST00000375661 PAX2Q02962 417 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 ACSM1Q08AH1 577 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 HNRNPA0Q13151 305 aaKnown RBP10.12□□□□□ -0.79
LSM2-208ENST00000375661 PRDX4Q13162 271 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 ZMYND11Q15326 602 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 SPHARQ15513 63 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 OR8G1Q15617 311 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 TMEM42Q69YG0 159 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 CCDC54Q8NEL0 328 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 OR5AK2Q8NH90 309 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 ITLN1Q8WWA0 313 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 SMIM19Q96E16 107 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 MEGF10Q96KG7 1140 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 PGLYRP3Q96LB9 341 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 OR2V2Q96R30 315 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 CITED1Q99966 193 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 ADAT1Q9BUB4 502 aaKnown RBP10.12□□□□□ -0.79
LSM2-208ENST00000375661 PAPOLGQ9BWT3 736 aaKnown RBP10.12□□□□□ -0.79
LSM2-208ENST00000375661 ENPP5Q9UJA9 477 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 PPP1R3CQ9UQK1 317 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 MPC1Q9Y5U8 109 aa10.12□□□□□ -0.79
LSM2-208ENST00000375661 IGHV3-64DA0A0J9YX35 117 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 SRRM5B3KS81 715 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 NDUFA7O95182 113 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 FSTL3O95633 263 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 PTBP3O95758 552 aaKnown RBP10.11□□□□□ -0.79
LSM2-208ENST00000375661 CRYBA1P05813 215 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 IGHV4-38-2P0DP08 117 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 PMELP40967 661 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 TAS2R43P59537 309 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 RPL15P61313 204 aaKnown RBP10.11□□□□□ -0.79
LSM2-208ENST00000375661 BDH1Q02338 343 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 EMX1Q04741 257 aaPredicted RBP10.11□□□□□ -0.79
LSM2-208ENST00000375661 MED22Q15528 200 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 TBCEQ15813 527 aaPredicted RBP10.11□□□□□ -0.79
LSM2-208ENST00000375661 KCTD21Q4G0X4 260 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 DMRTC1Q5HYR2 192 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 PRAMEF6Q5VXH4 476 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 WDR86Q86TI4 376 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 SPARTQ8N0X7 666 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 TMEM86BQ8N661 226 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 HPSE2Q8WWQ2 592 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 RAB40AQ8WXH6 277 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 OR5P3Q8WZ94 311 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 GHSRQ92847 366 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 ITPKCQ96DU7 683 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 COMMD4Q9H0A8 199 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 NOX4Q9NPH5 578 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 ACOT13Q9NPJ3 140 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 MIOXQ9UGB7 285 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 HHLA2Q9UM44 414 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 ZNF281Q9Y2X9 895 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 VWFP04275 2813 aa10.11□□□□□ -0.79
LSM2-208ENST00000375661 TRAV40A0A0B4J280 105 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 IGHV2-70DA0A0C4DH43 119 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 PNMA8CA0A1B0GUJ8 204 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 CEACAM18A8MTB9 384 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 TMEM178BH3BS89 294 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 HOXA3O43365 443 aaPredicted RBP10.1□□□□□ -0.79
LSM2-208ENST00000375661 CD1AP06126 327 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 CELP19835 753 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 OMGP23515 440 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 GNALP38405 381 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 GATA4P43694 442 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 SRP9P49458 86 aaKnown RBP10.1□□□□□ -0.79
LSM2-208ENST00000375661 RAG2P55895 527 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 RPS11P62280 158 aaKnown RBP eCLIP10.1□□□□□ -0.79
LSM2-208ENST00000375661 GNB2P62879 340 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 MPPED2Q15777 294 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 OLFML2AQ68BL7 652 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 MOB3CQ70IA8 216 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 ZDHHC23Q8IYP9 409 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 FTMTQ8N4E7 242 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 CELF2-AS1Q8N7Q2 184 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 SPERTQ8NA61 448 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 OR8S1Q8NH09 359 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 ZNF420Q8TAQ5 688 aaPredicted RBP10.1□□□□□ -0.79
LSM2-208ENST00000375661 ZDHHC16Q969W1 377 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 DACT3Q96B18 629 aaPredicted RBP10.1□□□□□ -0.79
LSM2-208ENST00000375661 FGGYQ96C11 551 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 ADAT3Q96EY9 351 aaPredicted RBP10.1□□□□□ -0.79
LSM2-208ENST00000375661 OPALINQ96PE5 141 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 GCM1Q9NP62 436 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 GPR173Q9NS66 373 aa10.1□□□□□ -0.79
LSM2-208ENST00000375661 NOP16Q9Y3C1 178 aaKnown RBP10.1□□□□□ -0.79
LSM2-208ENST00000375661 TRBV5-5A0A0J9YX44 114 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 KIR2DS1A0A191URI9 304 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 CLPSL1A2RUU4 121 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 FAM181BA6NEQ2 426 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 ANXA2P2A6NMY6 339 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms