RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 FZD2Q14332 565 aa12.13□□□□□ -0.47
MCF2L-204ENST00000375608 HMGN3Q15651 99 aa12.13□□□□□ -0.47
MCF2L-204ENST00000375608 C9orf135Q5VTT2 229 aa12.13□□□□□ -0.47
MCF2L-204ENST00000375608 FAM166AQ6J272 317 aa12.13□□□□□ -0.47
MCF2L-204ENST00000375608 LCN15Q6UWW0 184 aa12.13□□□□□ -0.47
MCF2L-204ENST00000375608 OR11L1Q8NGX0 322 aa12.13□□□□□ -0.47
MCF2L-204ENST00000375608 PIGCQ92535 297 aa12.13□□□□□ -0.47
MCF2L-204ENST00000375608 MRGPRFQ96AM1 343 aa12.13□□□□□ -0.47
MCF2L-204ENST00000375608 SLC35B3Q9H1N7 401 aa12.13□□□□□ -0.47
MCF2L-204ENST00000375608 TMPRSS5Q9H3S3 457 aa12.13□□□□□ -0.47
MCF2L-204ENST00000375608 GNG13Q9P2W3 67 aa12.13□□□□□ -0.47
MCF2L-204ENST00000375608 A0A087WZY1 265 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 A6NCN8 305 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 WIPF3A6NGB9 483 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 FCARP24071 287 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 CAPZBP47756 277 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 MMP16P51512 607 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 CTAG1AP78358 180 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 SLC35A1P78382 337 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 C17orf67Q0P5P2 114 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 ZNF239Q16600 458 aaKnown RBP12.12□□□□□ -0.47
MCF2L-204ENST00000375608 MST1LQ2TV78 715 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 OR2T2Q6IF00 324 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 SLC38A9Q8NBW4 561 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 ZNF519Q8TB69 540 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 SLC25A43Q8WUT9 341 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-204ENST00000375608 RNF133Q8WVZ7 376 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 NIPSNAP3BQ9BS92 247 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 FGF21Q9NSA1 209 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 CD207Q9UJ71 328 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 THSD7BQ9C0I4 1608 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 SPTY2D1-AS1A0A0U1RR47 76 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 E5RGE8 158 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 CNOT4O95628 575 aaKnown RBP12.12□□□□□ -0.47
MCF2L-204ENST00000375608 GABRG2P18507 467 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 CSNK1A1P48729 337 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 RTL10Q7L3V2 364 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 PLPP5Q8NEB5 264 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 TSTD1Q8NFU3 115 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 GPBAR1Q8TDU6 330 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 ASB10Q8WXI3 467 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 NSG2Q9Y328 171 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 ZNF407Q9C0G0 2248 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 A0A1W2PR80 420 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 DHRS7CA6NNS2 312 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 DXOO77932 396 aaKnown RBP12.12□□□□□ -0.47
MCF2L-204ENST00000375608 IGFBP3P17936 291 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-204ENST00000375608 FSTP19883 344 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 CSNK1EP49674 416 aaKnown RBP12.12□□□□□ -0.47
MCF2L-204ENST00000375608 DEFB126Q9BYW3 111 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 OR51M1Q9H341 326 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 GVINP1Q7Z2Y8 2422 aa12.12□□□□□ -0.47
MCF2L-204ENST00000375608 A0A0A6YYD4 124 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 EIF1BO60739 113 aaKnown RBP12.11□□□□□ -0.47
MCF2L-204ENST00000375608 HPNP05981 417 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 FOLR1P15328 257 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 EIF1P41567 113 aaKnown RBP12.11□□□□□ -0.47
MCF2L-204ENST00000375608 RTBDNQ9BSG5 229 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-204ENST00000375608 DNAJB11Q9UBS4 358 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 MS4A18H0YCH9 400 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 H0YL77 283 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 IGHV3-9P01782 118 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 RNF224P0DH78 156 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 DCAF7P61962 342 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 RUNX1Q01196 453 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 MS4A18Q3C1V0 323 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 AQP10Q96PS8 301 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 PECRQ9BY49 303 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 GPR61Q9BZJ8 451 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 CACFD1Q9UGQ2 172 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 DUSP1P28562 367 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 SUPT4H1P63272 117 aaKnown RBP12.11□□□□□ -0.47
MCF2L-204ENST00000375608 FDX2Q6P4F2 183 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 DOK3Q7L591 496 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 CA5BP1Q8WTZ4 195 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 HPSE2Q8WWQ2 592 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 IL1F10Q8WWZ1 152 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 SSX3Q99909 188 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 OCSTAMPQ9BR26 566 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 ZNF319Q9P2F9 582 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 PRUNE2Q8WUY3 3088 aa12.11□□□□□ -0.47
MCF2L-204ENST00000375608 IGKV1D-8A0A087WSZ0 117 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 CXorf65A6NEN9 183 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 F8VVB4 439 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 F8VWA3 439 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 HMGB3O15347 200 aaKnown RBP12.1□□□□□ -0.47
MCF2L-204ENST00000375608 OR2J2O76002 312 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 LINC00271P0C7V0 271 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 IDH3GP51553 393 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-204ENST00000375608 ZNF600Q6ZNG1 722 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 GPR137CQ8N3F9 429 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 ABHD14AQ9BUJ0 271 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 GGACTQ9BVM4 153 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 OR51B6Q9H340 312 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 PARP11Q9NR21 331 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 TLCD2A6NGC4 264 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 FIGNL2A6NMB9 653 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 POC1AQ8NBT0 407 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 OR14L1PQ8NHC6 308 aa12.1□□□□□ -0.47
MCF2L-204ENST00000375608 SP7Q8TDD2 431 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms