RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 FBXL14Q8N1E6 418 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 FAM24BQ8N5W8 94 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 SLC25A43Q8WUT9 341 aaPredicted RBP5.81□□□□□ -1.48
SMC1A-202ENST00000375340 TVP23CQ96ET8 276 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 FAM24AA6NFZ4 105 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 TNFSF14O43557 240 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 CXCL13O43927 109 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 DUS4LO95620 317 aaKnown RBP5.81□□□□□ -1.48
SMC1A-202ENST00000375340 CLDN15P56746 228 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 AWAT1Q58HT5 328 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 GUSBP11Q6P575 273 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 NR2C2APQ86WQ0 139 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 ZNRF4Q8WWF5 429 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 SPACA9Q96E40 222 aaPredicted RBP5.81□□□□□ -1.48
SMC1A-202ENST00000375340 AMDHD2Q9Y303 409 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 BCL3P20749 454 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 CYB561P49447 251 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 FZD5Q13467 585 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PLGLAQ15195 96 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 OR8B8Q15620 311 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PDLIM3Q53GG5 364 aaPredicted RBP5.8□□□□□ -1.48
SMC1A-202ENST00000375340 FHL5Q5TD97 284 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 H2BFWTQ7Z2G1 175 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 HSD17B13Q7Z5P4 300 aaPredicted RBP5.8□□□□□ -1.48
SMC1A-202ENST00000375340 AGBL5Q8NDL9 886 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 OR1F12Q8NHA8 337 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF721Q8TF20 911 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 KISS1RQ969F8 398 aaPredicted RBP5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PLEKHF2Q9H8W4 249 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 UQCC1Q9NVA1 299 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 TP53TG5Q9Y2B4 290 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 MMP24Q9Y5R2 645 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 A0A087WZY1 265 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 ID4P47928 161 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 MEOX2P50222 304 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 CD200R1LQ6Q8B3 271 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 APH1AQ96BI3 265 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 V9GYS6 101 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 DVL1P1P54792 670 aaPredicted RBP5.8□□□□□ -1.48
SMC1A-202ENST00000375340 OR8G1Q15617 311 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PRRX2Q99811 253 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PLEKHA2Q9HB19 425 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 OR5AC2Q9NZP5 309 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 GNG12Q9UBI6 72 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PIGBOS1A0A0B4J2F0 54 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF732B4DXR9 585 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 ARPC3O15145 178 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PJVKQ0ZLH3 352 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 HGDQ93099 445 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PATZ1Q9HBE1 687 aaKnown RBP5.8□□□□□ -1.48
SMC1A-202ENST00000375340 GSK3AP49840 483 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 DYNLT3P51808 116 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PIGYQ3MUY2 71 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 OVCH2Q7RTZ1 564 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF561Q8N587 486 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 DOCK6Q96HP0 2047 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PLXNB3Q9ULL4 1909 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 ALG1L2C9J202 215 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PIN1P1O15428 100 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 CST4P01036 141 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 SLC25A6P12236 298 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 TMEM33P57088 247 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 RAB31Q13636 194 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 C2orf68Q2NKX9 166 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 OR2A2Q6IF42 318 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 BAGE3Q86Y29 109 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 BAGE2Q86Y30 109 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 NAA60Q9H7X0 242 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 ICAM5Q9UMF0 924 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 R4GN57 208 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 C3orf85A0A1B0GTC6 90 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 CYTIPO60759 359 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 HOXC4P09017 264 aaPredicted RBP5.8□□□□□ -1.48
SMC1A-202ENST00000375340 BTCP35070 178 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 SELENOVP59797 346 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 FUT7Q11130 342 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 PRSS54Q6PEW0 395 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 SKA3Q8IX90 412 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 OR10V1Q8NGI7 309 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 OR13D1Q8NGV5 346 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 C12orf10Q9HB07 376 aa5.8□□□□□ -1.48
SMC1A-202ENST00000375340 LILRA5A6NI73 299 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 DHRS3O75911 302 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 G0S2P27469 103 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 FABP9Q0Z7S8 132 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 PTCRAQ6ISU1 281 aaPredicted RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 BTNL3Q6UXE8 466 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 TNFSF18Q9UNG2 199 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 DEFB108AA8MXU0 73 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 RPS4Y1P22090 263 aaKnown RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 EDDM3BP56851 147 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 C6orf15Q6UXA7 325 aaPredicted RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 APOBEC4Q8WW27 367 aaKnown RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 MRPL24Q96A35 216 aaKnown RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 UBL7Q96S82 380 aaPredicted RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 SERPINE3A8MV23 424 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 DFFBO76075 338 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 POU2F2P09086 479 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 GLB1P16278 677 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 GALNSP34059 522 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms