RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PERPQ96FX8 193 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 FBXL17Q9UF56 701 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 NAT8BQ9UHF3 227 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 PDCD6O75340 191 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 CD1CP29017 333 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 CLN3Q13286 438 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 VSTM2AQ8TAG5 236 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF596Q8TC21 504 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 HIF1ANQ9NWT6 349 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 SCO1O75880 301 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 POU2F2P09086 479 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 ANKRD34CP0C6C1 535 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 SLC2A1P11166 492 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 HNF1AP20823 631 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 FCARP24071 287 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 ADAT1Q9BUB4 502 aaKnown RBP9.13□□□□□ -0.95
PTCH1-204ENST00000375290 ZBP1Q9H171 429 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 CDC34P49427 236 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-204ENST00000375290 PPP1CAP62136 330 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF766Q5HY98 468 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 FA2HQ7L5A8 372 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 MEX3DQ86XN8 651 aaKnown RBP9.13□□□□□ -0.95
PTCH1-204ENST00000375290 FAM3CQ92520 227 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 PCDHGA9Q9Y5G4 932 aaKnown RBP9.13□□□□□ -0.95
PTCH1-204ENST00000375290 ALG1L2C9J202 215 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 CD8AP01732 235 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF77Q15935 545 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 KLHDC9Q8NEP7 349 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 TMEM231Q9H6L2 316 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 PRICKLE3O43900 615 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-204ENST00000375290 OR7C2O60412 319 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 FCMRO60667 390 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 KISS1Q15726 138 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 MAP1LC3CQ9BXW4 147 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 PRSS50Q9UI38 385 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 BRS3P32247 399 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 GABRA4P48169 554 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 DEFB110Q30KQ9 67 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 DHRS7BQ6IAN0 325 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-204ENST00000375290 ULBP3Q9BZM4 244 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 ANXA10Q9UJ72 324 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 FGF17O60258 216 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 ETHE1O95571 254 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 OR11H7Q8NGC8 314 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 C11orf40Q8WZ69 217 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 DNAJB12Q9NXW2 375 aaKnown RBP9.12□□□□□ -0.95
PTCH1-204ENST00000375290 WDR1O75083 606 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 OR52B4Q8NGK2 314 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 LINC00597Q9H2U6 94 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 SH2D2AQ9NP31 389 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 TAAR3PQ9P1P4 343 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 ZDHHC8Q9ULC8 765 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 CDX1P47902 265 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-204ENST00000375290 LIAT1Q6ZQX7 453 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 BCL2L2Q92843 193 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-204ENST00000375290 MTCH1Q9NZJ7 389 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 WISP3O95389 354 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-204ENST00000375290 PAX5Q02548 391 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 ETV3LQ6ZN32 361 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 TINAGL1Q9GZM7 467 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-204ENST00000375290 TRAV9-1A0A075B6T8 112 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 TMEM238LA0A1B0GVL6 79 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 A6NJY4 79 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 DBX1A6NMT0 343 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 DHRS7CA6NNS2 312 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A26D6RGX4 464 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 OR5G3P0C626 314 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 GPM6AP51674 278 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 SLC38A11Q08AI6 406 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 TUSC1Q2TAM9 212 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 BANF2Q9H503 90 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF552Q9H707 407 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-204ENST00000375290 PLAC1Q9HBJ0 212 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 FGF21Q9NSA1 209 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 DSCR4P56555 118 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-204ENST00000375290 C16orf52Q8NHV5 167 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 RHNO1Q9BSD3 238 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 AAMDCQ9H7C9 122 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 MPC1Q9Y5U8 109 aa9.12□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF638Q14966 1978 aaKnown RBP9.11□□□□□ -0.95
PTCH1-204ENST00000375290 GNG3P63215 75 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 RAB32Q13637 225 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 SF3B5Q9BWJ5 86 aaKnown RBP9.11□□□□□ -0.95
PTCH1-204ENST00000375290 KCNK7Q9Y2U2 307 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 SLC31A2O15432 143 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF207O43670 478 aaKnown RBP9.11□□□□□ -0.95
PTCH1-204ENST00000375290 HLA-DQA1P01909 254 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 ARG2P78540 354 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 LCN2P80188 198 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 OR52L2PQ8NGH6 319 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 MIXL1Q9H2W2 232 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 CLCF1Q9UBD9 225 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 RNPS1Q15287 305 aaKnown RBP9.11□□□□□ -0.95
PTCH1-204ENST00000375290 MARCH3Q86UD3 253 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 PMCHL2Q9BQD1 86 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 CARHSP1Q9Y2V2 147 aaKnown RBP9.11□□□□□ -0.95
PTCH1-204ENST00000375290 LOC102723971A0A1B0GUV8 181 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 DEFA4P12838 97 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 CEBPBP17676 345 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 DDTP30046 118 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms