RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ARL6IP1Q15041 203 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 VAX1Q5SQQ9 334 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 CRIP3Q6Q6R5 217 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 KCTD9Q7L273 389 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 ZNF546Q86UE3 836 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 TMEM17Q86X19 198 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 HOGA1Q86XE5 327 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 SKA3Q8IX90 412 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 MITD1Q8WV92 249 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 SEC22AQ96IW7 307 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 OR6C65A6NJZ3 312 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 SERPINE3A8MV23 424 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 CCSO14618 274 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 SYNGR4O95473 234 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 HPNP05981 417 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 PRKACBP22694 351 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 GABRR1P24046 479 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 MAGEA5P43359 124 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 NPY4RP50391 375 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 SNU13P55769 128 aaKnown RBP10.51□□□□□ -0.73
HMGCL-202ENST00000374487 TAS2R31P59538 309 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 RSU1Q15404 277 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 CNN3Q15417 329 aaKnown RBP10.51□□□□□ -0.73
HMGCL-202ENST00000374487 CSNK2A3Q8NEV1 391 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 ST8SIA4Q92187 359 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 PECRQ9BY49 303 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 PRRG4Q9BZD6 226 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 WNT5BQ9H1J7 359 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 PARPBPQ9NWS1 579 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 ZNF391Q9UJN7 358 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 ANAPC10Q9UM13 185 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 FAM208BQ5VWN6 2430 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 RTTNQ86VV8 2226 aa10.51□□□□□ -0.73
HMGCL-202ENST00000374487 RPS10-NUDT3A0A1W2PQS6 291 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 DUS4LO95620 317 aaKnown RBP10.5□□□□□ -0.73
HMGCL-202ENST00000374487 PLATP00750 562 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 IL2RAP01589 272 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 RPA2P15927 270 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 LHX2P50458 406 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 PRSS12P56730 875 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 TAS2R46P59540 309 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 LRRC37A5PQ49AS3 106 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 TSPO2Q5TGU0 170 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 RTL6Q6ICC9 239 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 GSG1LQ6UXU4 331 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 ZNF843Q8N446 348 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 FGFBP3Q8TAT2 258 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 TMEM45BQ96B21 275 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 BORCS8Q96FH0 119 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 SCGB3A2Q96PL1 93 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 TM2D1Q9BX74 207 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 TTTY12Q9BZ98 90 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 METTL9Q9H1A3 318 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 RGCCQ9H4X1 137 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.5□□□□□ -0.73
HMGCL-202ENST00000374487 PLEKHJ1Q9NW61 149 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 LUZP4Q9P127 313 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 HTR3BO95264 441 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 NRASP01111 189 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 CD8AP01732 235 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 SERPINA5P05154 406 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 RBP2P50120 134 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 CHRFAM7AQ494W8 412 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 TMEM128Q5BJH2 165 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 NHLRC3Q5JS37 347 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 NKAPLQ5M9Q1 402 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 COMMD7Q86VX2 200 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 FER1L6-AS2Q96M78 137 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 IP6K3Q96PC2 410 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 FN3KRPQ9HA64 309 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 CALHM2Q9HA72 323 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 ZNF701Q9NV72 531 aaPredicted RBP10.5□□□□□ -0.73
HMGCL-202ENST00000374487 MCTS1Q9ULC4 181 aaKnown RBP10.5□□□□□ -0.73
HMGCL-202ENST00000374487 CSAG2Q9Y5P2 127 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 NCKAP5O14513 1909 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 CFAP46Q8IYW2 2715 aa10.5□□□□□ -0.73
HMGCL-202ENST00000374487 IGKV3D-15A0A087WSY6 115 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 TRAV14DV4A0A0A6YYC5 116 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 SPRY1O43609 319 aaPredicted RBP10.49□□□□□ -0.73
HMGCL-202ENST00000374487 ANGPTL7O43827 346 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 HLA-GP17693 338 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 PABPC1L2AQ5JQF8 200 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 PLXDC2Q6UX71 529 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 C6orf201Q7Z4U5 140 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 MAFIPQ8WZ33 124 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 CYYR1Q96J86 154 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 FAM117AQ9C073 453 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 SLC6A15Q9H2J7 730 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 EHFQ9NZC4 300 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 SLC7A11Q9UPY5 501 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 KIAA1549Q9HCM3 1950 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 C13orf42A0A1B0GVH6 325 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 C5orf51A6NDU8 294 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 FOXI3A8MTJ6 420 aaPredicted RBP10.49□□□□□ -0.73
HMGCL-202ENST00000374487 SDCBPO00560 298 aaPredicted RBP10.49□□□□□ -0.73
HMGCL-202ENST00000374487 P2RX3P56373 397 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 CLDN18P56856 261 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 ARF1P84077 181 aaKnown RBP10.49□□□□□ -0.73
HMGCL-202ENST00000374487 ZNF92Q03936 586 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 PPA1Q15181 289 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms