RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 MED13Q9UHV7 2174 aa20.72■□□□□ 0.91
CDK9-201ENST00000373264 IGKV1-12A0A0C4DH73 117 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 ZNF587BE7ETH6 402 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 IGKV1D-12P01611 117 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 HOXB5P09067 269 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 ZNF92Q03936 586 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 PIGYQ3MUY2 71 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 ACTBL2Q562R1 376 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 TMEM200AQ86VY9 491 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 OR52H1Q8NGJ2 320 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 ARRDC1-AS1Q9H2J1 176 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 FOXJ2Q9P0K8 574 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 B4E171 279 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 TSPAN7P41732 249 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 ATRAIDQ6UW56 229 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 RAB11FIP2Q7L804 512 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 THOC3Q96J01 351 aaKnown RBP20.71■□□□□ 0.91
CDK9-201ENST00000373264 GHRLQ9UBU3 117 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 SESN1Q9Y6P5 492 aa20.71■□□□□ 0.91
CDK9-201ENST00000373264 A0A0B4J2A0 478 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 PTGER4P35408 488 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 CYB561P49447 251 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 FOXO1Q12778 655 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 RPUSD3Q6P087 351 aaKnown RBP20.7■□□□□ 0.9
CDK9-201ENST00000373264 ZBTB44Q8NCP5 570 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 EMG1Q92979 244 aaKnown RBP20.7■□□□□ 0.9
CDK9-201ENST00000373264 SIGLEC12Q96PQ1 595 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 SLC25A32Q9H2D1 315 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.7■□□□□ 0.9
CDK9-201ENST00000373264 SHPKQ9UHJ6 478 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 OR6C6A6NF89 314 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 CST2P09228 141 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 ACP1P24666 158 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 MOB3CQ70IA8 216 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 FOXRED2Q8IWF2 684 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 ZNF2Q9BSG1 426 aaPredicted RBP20.7■□□□□ 0.9
CDK9-201ENST00000373264 GSKIPQ9P0R6 139 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 AK3Q9UIJ7 227 aa20.7■□□□□ 0.9
CDK9-201ENST00000373264 CBX5P45973 191 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 FOXG1P55316 489 aaPredicted RBP20.69■□□□□ 0.9
CDK9-201ENST00000373264 RSU1Q15404 277 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 SMUG1Q53HV7 270 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 ABLIM2Q6H8Q1 611 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 SULF2Q8IWU5 870 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 KCNE4Q8WWG9 221 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 OR2H1Q9GZK4 316 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 SHARPINQ9H0F6 387 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 METTL8Q9H825 291 aaKnown RBP20.69■□□□□ 0.9
CDK9-201ENST00000373264 GPR35Q9HC97 309 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 SERPINE3A8MV23 424 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 C9orf172C9J069 976 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 RIPPLY1Q0D2K3 151 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 HSD17B13Q7Z5P4 300 aaPredicted RBP20.69■□□□□ 0.9
CDK9-201ENST00000373264 CPT1CQ8TCG5 803 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 SULT4A1Q9BR01 284 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 LRFN1Q9P244 771 aa20.69■□□□□ 0.9
CDK9-201ENST00000373264 GEMIN2O14893 280 aaKnown RBP20.68■□□□□ 0.9
CDK9-201ENST00000373264 CCL2P13500 99 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 GFRA1P56159 465 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 TAS2R46P59540 309 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 PPIAP62937 165 aaKnown RBP20.68■□□□□ 0.9
CDK9-201ENST00000373264 SNTB1Q13884 538 aaKnown RBP20.68■□□□□ 0.9
CDK9-201ENST00000373264 H3F3CQ6NXT2 135 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 CPEB3Q8NE35 698 aaKnown RBP20.68■□□□□ 0.9
CDK9-201ENST00000373264 ARPC5LQ9BPX5 153 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 NMES1Q9C002 83 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 SHANK1Q9Y566 2161 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 SFTPBP07988 381 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 SPINK2P20155 84 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 RAB32Q13637 225 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 SSPNQ14714 243 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 TSPO2Q5TGU0 170 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 CDCP2Q5VXM1 449 aa20.68■□□□□ 0.9
CDK9-201ENST00000373264 TSPAN4O14817 238 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 APOC1P02654 83 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 CSTBP04080 98 aaKnown RBP20.67■□□□□ 0.9
CDK9-201ENST00000373264 EDN3P14138 238 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 AKR1C2P52895 323 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 AKR1C1Q04828 323 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 TMEM17Q86X19 198 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 PIK3IP1Q96FE7 263 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 MARS2Q96GW9 593 aaKnown RBP20.67■□□□□ 0.9
CDK9-201ENST00000373264 PLA2G3Q9NZ20 509 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 A0A096LPE4 126 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 A0A1W2PPZ6 126 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 SERPINA7P05543 415 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 FAM3AP98173 230 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 SCRN3Q0VDG4 424 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 METTL9Q9H1A3 318 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 TAS2R3Q9NYW6 316 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 CRIM1Q9NZV1 1036 aa20.67■□□□□ 0.9
CDK9-201ENST00000373264 NRASP01111 189 aa20.66■□□□□ 0.9
CDK9-201ENST00000373264 APOC3P02656 99 aa20.66■□□□□ 0.9
CDK9-201ENST00000373264 GP1BAP07359 652 aa20.66■□□□□ 0.9
CDK9-201ENST00000373264 GLI4P10075 376 aa20.66■□□□□ 0.9
CDK9-201ENST00000373264 ICAM2P13598 275 aa20.66■□□□□ 0.9
CDK9-201ENST00000373264 FAM189A2Q15884 450 aa20.66■□□□□ 0.9
CDK9-201ENST00000373264 C5orf24Q7Z6I8 188 aa20.66■□□□□ 0.9
CDK9-201ENST00000373264 OR1S2Q8NGQ3 325 aa20.66■□□□□ 0.9
CDK9-201ENST00000373264 CYTL1Q9NRR1 136 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms