RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LANCL1O43813 399 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 IGHA1P01876 353 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 IGHA2P01877 340 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 HTR1DP28221 377 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 SSPNQ14714 243 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 ETFDHQ16134 617 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 Q3ZCU0 254 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 WDR73Q6P4I2 378 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 ZNF66Q6ZN08 573 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 CCDC190Q86UF4 302 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 SLC26A1Q9H2B4 701 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 TNFRSF12AQ9NP84 129 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 MAP1LC3B2A6NCE7 125 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 OR5AL1P0C617 328 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 KLF3P57682 345 aaPredicted RBP10.3□□□□□ -0.76
VCL-202ENST00000372755 CA5BP1Q8WTZ4 195 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 VN1R1Q9GZP7 353 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 MAP1LC3BQ9GZQ8 125 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 OR1A1Q9P1Q5 309 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 DEFB108AA8MXU0 73 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 CLDN34H7C241 214 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 CD200P41217 278 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 TCTEX1D1Q8N7M0 179 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 OR1L1Q8NH94 360 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 TM4SF19Q96DZ7 209 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 ADTRPQ96IZ2 230 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 RAB1BQ9H0U4 201 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 CXXC4Q9H2H0 198 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 WSB1Q9Y6I7 421 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 SHISA8B8ZZ34 492 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 FABP4P15090 132 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 HIST1H3AP68431 136 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 ZNF154Q13106 437 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 IL13RA2Q14627 380 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 SP6Q3SY56 376 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 CLLU1Q5K131 121 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 ZBTB37Q5TC79 503 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.29□□□□□ -0.76
VCL-202ENST00000372755 MAP6Q96JE9 813 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 PECRQ9BY49 303 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 NARFLQ9H6Q4 476 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 NQO2P16083 231 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 SLC6A1P30531 599 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 CCR2P41597 374 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 Q7L0L9 218 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 SFTPA2Q8IWL1 248 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 SFTPA1Q8IWL2 248 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 HSD17B10Q99714 261 aaKnown RBP10.29□□□□□ -0.76
VCL-202ENST00000372755 NAA60Q9H7X0 242 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 NEURL1O76050 574 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 OR4A8P0C604 315 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 MYF5P13349 255 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 AREGP15514 252 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 FGF9P31371 208 aaPredicted RBP10.29□□□□□ -0.76
VCL-202ENST00000372755 SLC37A1P57057 533 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 FAM27D1Q5T7N8 215 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 DHRS11Q6UWP2 260 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 CARFQ8N187 725 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 TP53I13Q8NBR0 393 aaPredicted RBP10.29□□□□□ -0.76
VCL-202ENST00000372755 MYEOVQ96EZ4 313 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 ZFP64Q9NPA5 681 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 PABPC1L2AQ5JQF8 200 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 COL13A1Q5TAT6 717 aaPredicted RBP10.29□□□□□ -0.76
VCL-202ENST00000372755 ZNF788Q6ZQV5 615 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 MYO10Q9HD67 2058 aa10.29□□□□□ -0.76
VCL-202ENST00000372755 FAM90A27PA6NNH2 459 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 K7ESF4 209 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 CDC34P49427 236 aaPredicted RBP10.28□□□□□ -0.76
VCL-202ENST00000372755 B4GALNT1Q00973 533 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 DMRTC1Q5HYR2 192 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 ZNF774Q6NX45 483 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 ETV3LQ6ZN32 361 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 MCHR2Q969V1 340 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 OR2D2Q9H210 308 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 DNAJB12Q9NXW2 375 aaKnown RBP10.28□□□□□ -0.76
VCL-202ENST00000372755 OR6C3Q9NZP0 311 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 PLPP2O43688 288 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 PDCD6O75340 191 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 PTBP3O95758 552 aaKnown RBP10.28□□□□□ -0.76
VCL-202ENST00000372755 OR3A4PP47883 348 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 TCTN1Q2MV58 587 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 ACER2Q5QJU3 275 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 SPICQ8N5J4 248 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 OR2M3Q8NG83 312 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 ANGPTL6Q8NI99 470 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 RAB1CQ92928 201 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 PLPPR2Q96GM1 343 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 C4orf45Q96LM5 186 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 EXOGQ9Y2C4 368 aaKnown RBP10.28□□□□□ -0.76
VCL-202ENST00000372755 RGPD8O14715 1765 aaPredicted RBP10.28□□□□□ -0.76
VCL-202ENST00000372755 OR5B21A6NL26 309 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 MBTPS2O43462 519 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 CDC14BO60729 498 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 ZNF737O75373 536 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 CD96P40200 585 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 TUSC1Q2TAM9 212 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 OR5C1Q8NGR4 320 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 OR1L3Q8NH93 324 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 BLNKQ8WV28 456 aa10.28□□□□□ -0.76
VCL-202ENST00000372755 CCL17Q92583 94 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms