RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ITPR1Q14643 2758 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 TMEM269A0A1B0GVZ9 245 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 ALG1L2C9J202 215 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 C11orf98E9PRG8 122 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 G3V3Y1 287 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 PLPP3O14495 311 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 SGCEO43556 437 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 JTBO76095 146 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 S100A6P06703 90 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 CD46P15529 392 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 MAS1LP35410 378 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 UCP2P55851 309 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 ZNF117Q03924 483 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 EIF2S3LQ2VIR3 472 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 ZNF766Q5HY98 468 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 TMEM268Q5VZI3 342 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 OR52W1Q6IF63 320 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 CLEC18BQ6UXF7 455 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 LHFPL1Q86WI0 220 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 GVQW1Q8N7I0 195 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 RNF133Q8WVZ7 376 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 TMEM230Q96A57 120 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 SULT4A1Q9BR01 284 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 HRH4Q9H3N8 390 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 C5orf66Q9H5L9 145 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 CACFD1Q9UGQ2 172 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 CACNA1BQ00975 2339 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 SMAD9O15198 467 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 ATXN7O15265 892 aaPredicted RBP10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 TSPAN2O60636 221 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 FARS2O95363 451 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 PMP2P02689 132 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 SP1P08047 785 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 H2BFMP0C1H6 154 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 CCL3P10147 92 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 NFYBP25208 207 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 DAP3P51398 398 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 SNRPEP62304 92 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 ARL6IP1Q15041 203 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 PPA1Q15181 289 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 PRAMEF20Q5VT98 475 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 C1orf140Q5VVS0 124 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 RTL6Q6ICC9 239 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 KLHL24Q6TFL4 600 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 Q6ZS92 163 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 GRINAQ7Z429 371 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 GALNTL5Q7Z4T8 443 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 MDS2Q8NDY4 140 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 KCNG3Q8TAE7 436 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 NANPQ8TBE9 248 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 C2CD4CQ8TF44 421 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 EMG1Q92979 244 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 HIST1H2BAQ96A08 127 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 C5orf34Q96MH7 638 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 GAL3ST1Q99999 423 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 FAM206AQ9NX38 181 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 RALYQ9UKM9 306 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 COA3Q9Y2R0 106 aaPredicted RBP10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 STARD10Q9Y365 291 aa10.04□□□□□ -0.8
TSPAN1-201ENST00000372003 EPG5Q9HCE0 2579 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 LOC100509620A0A075B734 347 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 TMED7-TICAM2A0A0A6YYA0 188 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 TRAV17A0A0B4J275 112 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 C2orf72A6NCS6 295 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 MSGN1A6NI15 193 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 TP53I11O14683 189 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 HCRTR2O43614 444 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 EIF1BO60739 113 aaKnown RBP10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 CA11O75493 328 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 MED6O75586 246 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 AHSA1O95433 338 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 P04436 131 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 HIST1H1DP16402 221 aaKnown RBP10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 EIF1P41567 113 aaKnown RBP10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 GLP1RP43220 463 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 LPAR6P43657 344 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 TAS2R46P59540 309 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 RAB1AP62820 205 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 DCXRQ7Z4W1 244 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 OR52N4Q8NGI2 321 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 TCTEX1D2Q8WW35 142 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 ZNF775Q96BV0 537 aaPredicted RBP10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 FGGYQ96C11 551 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 SGCZQ96LD1 299 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 BBC3Q96PG8 261 aaPredicted RBP10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 LPAR5Q9H1C0 372 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 SMDT1Q9H4I9 107 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 TMEM231Q9H6L2 316 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 GSN-AS1Q9NRJ2 163 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 OR5AC2Q9NZP5 309 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 GHRLQ9UBU3 117 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 CHCHD2Q9Y6H1 151 aaPredicted RBP10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 ATMQ13315 3056 aa10.03□□□□□ -0.8
TSPAN1-201ENST00000372003 P2RY10O00398 339 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 SYT7O43581 403 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 ICOSLGO75144 302 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 F12P00748 615 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms