RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ACOT7LQ6ZUV0 252 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 IZUMO1Q8IYV9 350 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 C17orf78Q8N4C9 275 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 ZIC4Q8N9L1 334 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 BPIFCQ8NFQ6 507 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 DERL3Q96Q80 235 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 OR14A2Q96R54 314 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 SF3B5Q9BWJ5 86 aaKnown RBP12.9□□□□□ -0.34
LMO4-201ENST00000370542 HEATR1Q9H583 2144 aaKnown RBP12.9□□□□□ -0.34
LMO4-201ENST00000370542 BARX1Q9HBU1 254 aaPredicted RBP12.9□□□□□ -0.34
LMO4-201ENST00000370542 PARPBPQ9NWS1 579 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 MRPL15Q9P015 296 aaKnown RBP12.9□□□□□ -0.34
LMO4-201ENST00000370542 KLK11Q9UBX7 282 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 OR5V1Q9UGF6 321 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 B3GALT5Q9Y2C3 310 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 MEGF8Q7Z7M0 2845 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 A0A0A6YYH2 397 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 TMEM218A2RU14 115 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 A6NJ64 397 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 LIPT2A6NK58 231 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 NPIPB7O75200 414 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 NDUFB2O95178 105 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 RLN1P04808 185 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 S100A9P06702 114 aaKnown RBP12.89□□□□□ -0.35
LMO4-201ENST00000370542 SMIM6P0DI80 62 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 HLA-GP17693 338 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 CDK2P24941 298 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 P2RY4P51582 365 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 CAPZA1P52907 286 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 TAS2R19P59542 299 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 GUCA2BQ16661 112 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 TMEM255AQ5JRV8 349 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 ELP2Q6IA86 826 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 FAM122BQ7Z309 247 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 TMEM229BQ8NBD8 167 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 OR10H5Q8NGA6 315 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 OR4D10Q8NGI6 311 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 NAA11Q9BSU3 229 aaPredicted RBP12.89□□□□□ -0.35
LMO4-201ENST00000370542 HCAR1Q9BXC0 346 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 C1QTNF6Q9BXI9 259 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 SLC7A10Q9NS82 523 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 GDF2Q9UK05 429 aaPredicted RBP12.89□□□□□ -0.35
LMO4-201ENST00000370542 GNG8Q9UK08 70 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 MOKQ9UQ07 419 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 SVEP1Q4LDE5 3571 aa12.89□□□□□ -0.35
LMO4-201ENST00000370542 POM121CA8CG34 1229 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 PHYHO14832 338 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 ARPC3O15145 178 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 NUPL2O15504 423 aaKnown RBP12.88□□□□□ -0.35
LMO4-201ENST00000370542 ZNF254O75437 659 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 SPDEFO95238 335 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 PPP1R3DO95685 299 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 FOLR2P14207 255 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 PAX6P26367 422 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 AKR1D1P51857 326 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 H2BFSP57053 126 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 ERVK-25P63136 954 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 NAAAQ02083 359 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 PCGF3Q3KNV8 242 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 AVPI1Q5T686 147 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 TSPO2Q5TGU0 170 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 ANKRD16Q6P6B7 361 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 ATRAIDQ6UW56 229 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 NHLRC1Q6VVB1 395 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 IL34Q6ZMJ4 242 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 DPY19L2P2Q6ZN68 376 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 TMEM185AQ8NFB2 350 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 OR52N5Q8NH56 324 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 GPR148Q8TDV2 347 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 ARL11Q969Q4 196 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 CBLN4Q9NTU7 201 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 ZFP57Q9NU63 452 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 STEAP1Q9UHE8 339 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 TNFSF18Q9UNG2 199 aa12.88□□□□□ -0.35
LMO4-201ENST00000370542 YLPM1P49750 1951 aaKnown RBP12.87□□□□□ -0.35
LMO4-201ENST00000370542 A0A0B4J203 849 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 TRBV5-5A0A0J9YX44 114 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 RNF222A6NCQ9 220 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 FAM74A7A6NL05 159 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 AQP7P3A6NL99 342 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 ELOA3DA6NLF2 546 aaPredicted RBP12.87□□□□□ -0.35
LMO4-201ENST00000370542 CD5LO43866 347 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 RLN2P04090 185 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 DCTDP32321 178 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 PRSS3P35030 304 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 SLC25A1P53007 311 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 EIF5AP63241 154 aaKnown RBP12.87□□□□□ -0.35
LMO4-201ENST00000370542 ELOA3BQ3SY89 546 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 FAM74A3Q4VXF1 159 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 C4orf46Q504U0 113 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 WBP2NLQ6ICG8 309 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 MUC20Q8N307 709 aaPredicted RBP12.87□□□□□ -0.35
LMO4-201ENST00000370542 DMBX1Q8NFW5 382 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 ELOA3Q8NG57 546 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 OR4C16Q8NGL9 310 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 OR13C5Q8NGS8 318 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 DNAJA3Q96EY1 480 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
LMO4-201ENST00000370542 AMDHD2Q9Y303 409 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms