RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 TMEM156Q8N614 296 aa15.3■□□□□ 0.04
CHTOP-203ENST00000368690 ZNF610Q8N9Z0 462 aa15.3■□□□□ 0.04
CHTOP-203ENST00000368690 OR51T1Q8NGJ9 327 aa15.3■□□□□ 0.04
CHTOP-203ENST00000368690 CPNE4Q96A23 557 aaPredicted RBP15.3■□□□□ 0.04
CHTOP-203ENST00000368690 MRPL24Q96A35 216 aaKnown RBP15.3■□□□□ 0.04
CHTOP-203ENST00000368690 SPACA5Q96QH8 159 aa15.3■□□□□ 0.04
CHTOP-203ENST00000368690 TM2D1Q9BX74 207 aa15.3■□□□□ 0.04
CHTOP-203ENST00000368690 PRDM13Q9H4Q3 707 aa15.3■□□□□ 0.04
CHTOP-203ENST00000368690 FBXO7Q9Y3I1 522 aa15.3■□□□□ 0.04
CHTOP-203ENST00000368690 BTBD17A6NE02 478 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 ZNF878C9JN71 531 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 PRH1P02810 166 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 HCKP08631 526 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 RBP2P50120 134 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 HHEXQ03014 270 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 C14orf28Q4W4Y0 310 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 LRTM2Q8N967 370 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 SEMA6DQ8NFY4 1073 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 TMEM234Q8WY98 164 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 MAFIPQ8WZ33 124 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 DAZLQ92904 295 aaKnown RBP15.29■□□□□ 0.04
CHTOP-203ENST00000368690 TGM7Q96PF1 710 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 PECRQ9BY49 303 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 SIRT7Q9NRC8 400 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 TLCD2A6NGC4 264 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 TMEM150CB9EJG8 249 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 HPNP05981 417 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 OR13C7P0DN81 318 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 AFF3P51826 1226 aaKnown RBP15.29■□□□□ 0.04
CHTOP-203ENST00000368690 HSF1Q00613 529 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 SFTPA2Q8IWL1 248 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 C14orf144Q96I85 54 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 GAL3ST4Q96RP7 486 aa15.29■□□□□ 0.04
CHTOP-203ENST00000368690 PHF3Q92576 2039 aaKnown RBP15.29■□□□□ 0.04
CHTOP-203ENST00000368690 SPAG17Q6Q759 2223 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 VPS13AQ96RL7 3174 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 IGKV3D-11A0A0A0MRZ8 115 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 A0A1W2PP11 408 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 GPR37O15354 613 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 GABRA4P48169 554 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 NDUFA6P56556 154 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 PLCXD2Q0VAA5 305 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 HLA-DQA1Q5Y7H0 255 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 DOK3Q7L591 496 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 STT3BQ8TCJ2 826 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 GPER1Q99527 375 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 KCNIP3Q9Y2W7 256 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 PCNX3Q9H6A9 2034 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 C17orf51A8MQB3 221 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 B4DGG1 531 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 H7C1Q1 480 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 APOBEC1P41238 236 aaKnown RBP15.28■□□□□ 0.04
CHTOP-203ENST00000368690 FHITP49789 147 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 REC114Q7Z4M0 266 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 ABHD12BQ7Z5M8 362 aaPredicted RBP15.28■□□□□ 0.04
CHTOP-203ENST00000368690 OR8B12Q8NGG6 310 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 BSCL2Q96G97 398 aaPredicted RBP15.28■□□□□ 0.04
CHTOP-203ENST00000368690 PCED1AQ9H1Q7 454 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 CHST11Q9NPF2 352 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 GPR27Q9NS67 375 aa15.28■□□□□ 0.04
CHTOP-203ENST00000368690 PUS1Q9Y606 427 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHTOP-203ENST00000368690 CEP192Q8TEP8 1941 aa15.27■□□□□ 0.04
CHTOP-203ENST00000368690 ZNF17P17021 662 aa15.27■□□□□ 0.04
CHTOP-203ENST00000368690 IL11P20809 199 aa15.27■□□□□ 0.04
CHTOP-203ENST00000368690 BLVRBP30043 206 aaPredicted RBP15.27■□□□□ 0.04
CHTOP-203ENST00000368690 SLC16A14Q7RTX9 510 aa15.27■□□□□ 0.04
CHTOP-203ENST00000368690 WDFY1Q8IWB7 410 aa15.27■□□□□ 0.04
CHTOP-203ENST00000368690 NTNG2Q96CW9 530 aa15.27■□□□□ 0.04
CHTOP-203ENST00000368690 ZNF2Q9BSG1 426 aaPredicted RBP15.27■□□□□ 0.04
CHTOP-203ENST00000368690 LRRC61Q9BV99 259 aa15.27■□□□□ 0.04
CHTOP-203ENST00000368690 UCK1Q9HA47 277 aa15.27■□□□□ 0.04
CHTOP-203ENST00000368690 GPR84Q9NQS5 396 aa15.27■□□□□ 0.04
CHTOP-203ENST00000368690 PADI1Q9ULC6 663 aa15.27■□□□□ 0.04
CHTOP-203ENST00000368690 WDFY4Q6ZS81 3184 aa15.27■□□□□ 0.03
CHTOP-203ENST00000368690 POU3F1Q03052 451 aaPredicted RBP15.26■□□□□ 0.03
CHTOP-203ENST00000368690 THEM4Q5T1C6 240 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 LCN10Q6JVE6 187 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 ST8SIA1Q92185 356 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 SUCNR1Q9BXA5 334 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 ZNF587BE7ETH6 402 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 SCGB1D2O95969 90 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 RD3LP0DJH9 198 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 PPP1CCP36873 323 aaKnown RBP15.26■□□□□ 0.03
CHTOP-203ENST00000368690 PKIAP61925 76 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 TMEM187Q14656 261 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 ELOBQ15370 118 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 LBHQ53QV2 105 aaPredicted RBP15.26■□□□□ 0.03
CHTOP-203ENST00000368690 C9orf40Q8IXQ3 194 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 APCDD1LQ8NCL9 501 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 LMX1AQ8TE12 382 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 MARS2Q96GW9 593 aaKnown RBP15.26■□□□□ 0.03
CHTOP-203ENST00000368690 IER2Q9BTL4 223 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 LHFPL6Q9Y693 200 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 ZDBF2Q9HCK1 2354 aa15.26■□□□□ 0.03
CHTOP-203ENST00000368690 NSG1A0A0A6YYJ2 146 aa15.25■□□□□ 0.03
CHTOP-203ENST00000368690 IGKV1-9A0A0C4DH69 117 aa15.25■□□□□ 0.03
CHTOP-203ENST00000368690 A0A1W2PNV4 684 aa15.25■□□□□ 0.03
CHTOP-203ENST00000368690 A0A1W2PR77 199 aa15.25■□□□□ 0.03
CHTOP-203ENST00000368690 RBFOX3A6NFN3 312 aa15.25■□□□□ 0.03
CHTOP-203ENST00000368690 ARGFXA6NJG6 315 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms