RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 TMEM89A2RUT3 159 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 DNAJC9-AS1A6NH13 148 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 NKX6-3A6NJ46 265 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 SNTNA6NMZ2 147 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 IGHA1P01876 353 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 ARF6P62330 175 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 IL13RA1P78552 427 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 ZSCAN26Q16670 478 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 LRRC10Q5BKY1 277 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 ACP7Q6ZNF0 438 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 PELI1Q96FA3 418 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 SDSLQ96GA7 329 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 MED30Q96HR3 178 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 MRPS18AQ9NVS2 196 aaKnown RBP15.62■□□□□ 0.09
CKS1B-203ENST00000368439 SMPD3Q9NY59 655 aaPredicted RBP15.62■□□□□ 0.09
CKS1B-203ENST00000368439 IGKV1-27A0A075B6S5 117 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 MDFIC2A0A1B0GVS7 189 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 UBCP0CG48 685 aaKnown RBP15.61■□□□□ 0.09
CKS1B-203ENST00000368439 PRTN3P24158 256 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 COMPP49747 757 aaPredicted RBP15.61■□□□□ 0.09
CKS1B-203ENST00000368439 CAV3P56539 151 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 BPIFB3P59826 476 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 GPR157Q5UAW9 335 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 METTL11BQ5VVY1 283 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 RUSC1-AS1Q66K80 236 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 RBMS3Q6XE24 437 aaKnown RBP15.61■□□□□ 0.09
CKS1B-203ENST00000368439 CD177Q8N6Q3 437 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 STMN2Q93045 179 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 RDH12Q96NR8 316 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 NRIP2Q9BQI9 281 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 CHST5Q9GZS9 411 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 HES4Q9HCC6 221 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 AMBNQ9NP70 447 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 SLC25A10Q9UBX3 287 aaPredicted RBP15.61■□□□□ 0.09
CKS1B-203ENST00000368439 KPTNQ9Y664 436 aa15.61■□□□□ 0.09
CKS1B-203ENST00000368439 WBP4O75554 376 aaKnown RBP15.6■□□□□ 0.09
CKS1B-203ENST00000368439 ISG15P05161 165 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 CCR9P51686 369 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 ERVK11-1P61568 191 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 BAMBIQ13145 260 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 GALEQ14376 348 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 PDCD1Q15116 288 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 DEFB112Q30KQ8 113 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 TMEM244Q5VVB8 128 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 LHFPL3Q86UP9 236 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 ANGPTL5Q86XS5 388 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 Q8N7P7 452 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 ZNRF1Q8ND25 227 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 TRMT10AQ8TBZ6 339 aaKnown RBP15.6■□□□□ 0.09
CKS1B-203ENST00000368439 C10orf35Q96D05 121 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 ADAT3Q96EY9 351 aaPredicted RBP15.6■□□□□ 0.09
CKS1B-203ENST00000368439 C4orf36Q96KX1 117 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 Q96MT0 163 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 DUX5Q96PT3 197 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 ADI1Q9BV57 179 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 PKIBQ9C010 78 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 PLEKHA1Q9HB21 404 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 FBN3Q75N90 2809 aa15.6■□□□□ 0.09
CKS1B-203ENST00000368439 CLDN34H7C241 214 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 J3QLW9 94 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 ZNF19P17023 458 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 GABRA2P47869 451 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 ACTA2P62736 377 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 ACTG1P63261 375 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 ACTG2P63267 376 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 RAB40BQ12829 278 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 IL24Q13007 206 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 SLC9A3R2Q15599 337 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 LPCAT4Q643R3 524 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 VMO1Q7Z5L0 202 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 SYS1Q8N2H4 156 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 KIR3DL3Q8N743 410 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 OR52I1Q8NGK6 324 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 OR10AC1Q8NH08 325 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 NPRL2Q8WTW4 380 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 ALG8Q9BVK2 526 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 ISG20L2Q9H9L3 353 aaKnown RBP15.59■□□□□ 0.09
CKS1B-203ENST00000368439 ELL3Q9HB65 397 aaPredicted RBP15.59■□□□□ 0.09
CKS1B-203ENST00000368439 ERVK13-1Q9NX77 482 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 POLDIP2Q9Y2S7 368 aa15.59■□□□□ 0.09
CKS1B-203ENST00000368439 IGHV1-69DA0A0B4J2H0 117 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 IGKV1-9A0A0C4DH69 117 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 FAM230AA0A1W2PPH8 454 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 RFPL4AA6NLU0 287 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 OR4C45A6NMZ5 311 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 RFPL4AL1F8VTS6 287 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 GATBO75879 557 aaKnown RBP15.58■□□□□ 0.08
CKS1B-203ENST00000368439 IGHV1-69P01742 117 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 HTR1AP08908 422 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 FUT6P51993 359 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 SMN1Q16637 294 aaKnown RBP15.58■□□□□ 0.08
CKS1B-203ENST00000368439 SMIM21Q3B7S5 101 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 EGFL6Q8IUX8 553 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 BATF2Q8N1L9 274 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 H1FXQ92522 213 aaKnown RBP15.58■□□□□ 0.08
CKS1B-203ENST00000368439 LHX4Q969G2 390 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 ZMAT3Q9HA38 289 aaKnown RBP15.58■□□□□ 0.08
CKS1B-203ENST00000368439 INPP5EQ9NRR6 644 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 MTCH1Q9NZJ7 389 aa15.58■□□□□ 0.08
CKS1B-203ENST00000368439 SLC7A11Q9UPY5 501 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms