RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 TAS2R45P59539 299 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 RPUSD3Q6P087 351 aaKnown RBP11.46□□□□□ -0.57
PTPRK-207ENST00000368226 APOBEC4Q8WW27 367 aaKnown RBP11.46□□□□□ -0.57
PTPRK-207ENST00000368226 OR2D2Q9H210 308 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 PRR13Q9NZ81 148 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 PTPRZ1P23471 2315 aaPredicted RBP11.46□□□□□ -0.58
PTPRK-207ENST00000368226 TMPRSS2O15393 492 aa11.46□□□□□ -0.58
PTPRK-207ENST00000368226 OPRK1P41145 380 aa11.46□□□□□ -0.58
PTPRK-207ENST00000368226 WDR74Q6RFH5 385 aaPredicted RBP11.46□□□□□ -0.58
PTPRK-207ENST00000368226 OR4D11Q8NGI4 311 aa11.46□□□□□ -0.58
PTPRK-207ENST00000368226 OR8D4Q8NGM9 314 aa11.46□□□□□ -0.58
PTPRK-207ENST00000368226 OR13G1Q8NGZ3 307 aa11.46□□□□□ -0.58
PTPRK-207ENST00000368226 CDX4O14627 284 aaPredicted RBP11.46□□□□□ -0.58
PTPRK-207ENST00000368226 GOSR1O95249 250 aa11.46□□□□□ -0.58
PTPRK-207ENST00000368226 CLDN20P56880 219 aa11.46□□□□□ -0.58
PTPRK-207ENST00000368226 C4orf17Q53FE4 359 aa11.46□□□□□ -0.58
PTPRK-207ENST00000368226 AVPI1Q5T686 147 aa11.46□□□□□ -0.58
PTPRK-207ENST00000368226 M1APQ8TC57 530 aa11.46□□□□□ -0.58
PTPRK-207ENST00000368226 ASB10Q8WXI3 467 aa11.46□□□□□ -0.58
PTPRK-207ENST00000368226 TRAV1-2A0A0B4J238 106 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 ZNF727A8MUV8 499 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 OR2J3O76001 311 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 JTBO76095 146 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 MT-ND4LP03901 98 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 SLC37A1P57057 533 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 PSG6Q00889 435 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 ZNF425Q6IV72 752 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 OR5AP2Q8NGF4 316 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 WDR34Q96EX3 536 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 POM121L2Q96KW2 1035 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 CNTD2Q9H8S5 307 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 DTX4Q9Y2E6 619 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 OR2C1O95371 312 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 C1QBP02746 253 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 IL5P05113 134 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 SLC25A1P53007 311 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 DHODHQ02127 395 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 HLXQ14774 488 aaPredicted RBP11.45□□□□□ -0.58
PTPRK-207ENST00000368226 PHYHD1Q5SRE7 291 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 TMEM52Q8NDY8 209 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 ADAM20O43506 726 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 GVQW1Q8N7I0 195 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 PTPMT1Q8WUK0 201 aaPredicted RBP11.45□□□□□ -0.58
PTPRK-207ENST00000368226 DOK5Q9P104 306 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 IGHV4-34P06331 123 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 APELAP0DMC3 54 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 OR8B12Q8NGG6 310 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 OR2T6Q8NHC8 308 aa11.45□□□□□ -0.58
PTPRK-207ENST00000368226 ZNF768Q9H5H4 540 aaKnown RBP11.45□□□□□ -0.58
PTPRK-207ENST00000368226 A0A1W2PPV9 198 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 SERPINE3A8MV23 424 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 PDGFBP01127 241 aaPredicted RBP11.44□□□□□ -0.58
PTPRK-207ENST00000368226 AKR1C3P42330 323 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 OR2F1Q13607 317 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 ZNF141Q15928 474 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 ZNF239Q16600 458 aaKnown RBP11.44□□□□□ -0.58
PTPRK-207ENST00000368226 MESTQ5EB52 335 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 D2HGDHQ8N465 521 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 NPEPL1Q8NDH3 523 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 OR10Z1Q8NGY1 313 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 M0QZ24 198 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 VMA21Q3ZAQ7 101 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 HMGCLL1Q8TB92 370 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 SRRQ9GZT4 340 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 OCEL1Q9H607 264 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 IGHV3OR15-7A0A075B7D8 119 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 NUDT19A8MXV4 375 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 ACSM6Q6P461 480 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 CD3EP07766 207 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 LPAR6P43657 344 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 OR3A1P47881 315 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 TMEM229BQ8NBD8 167 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 HES4Q9HCC6 221 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 UBR3Q6ZT12 1888 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 RND1Q92730 232 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 CORO2AQ92828 525 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 SPSB1Q96BD6 273 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 NDFIP1Q9BT67 221 aa11.44□□□□□ -0.58
PTPRK-207ENST00000368226 ATXN7O15265 892 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-207ENST00000368226 SLC22A18ASQ8N1D0 253 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 GNPNAT1Q96EK6 184 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-207ENST00000368226 VSTM2LQ96N03 204 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 KIAA1217Q5T5P2 1943 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 C20orf202A1L168 122 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 CYTIPO60759 359 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 HIST1H1DP16402 221 aaKnown RBP11.43□□□□□ -0.58
PTPRK-207ENST00000368226 JMJD6Q6NYC1 403 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-207ENST00000368226 MOGAT3Q86VF5 341 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 SULT1A3P0DMM9 295 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 SULT1A4P0DMN0 295 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 COX5AP20674 150 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 OXA1LQ15070 435 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 SMIM4Q8WVI0 70 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 NKX6-2Q9C056 277 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-207ENST00000368226 ADAM10O14672 748 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 CTF1Q16619 201 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 PNLIPRP3Q17RR3 467 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 BLNKQ8WV28 456 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 DUSP15Q9H1R2 295 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-207ENST00000368226 SLC35D1Q9NTN3 355 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms