RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 CYC1P08574 325 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 ACAA2P42765 397 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 OR10P1Q8NGE3 313 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 PARP12Q9H0J9 701 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 FBXO4Q9UKT5 387 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 TRBV5-5A0A0J9YX44 114 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 MFSD2BA6NFX1 497 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 TIMM8AO60220 97 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 GPR119Q8TDV5 335 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 ZFP64Q9NPA5 681 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 SERGEFQ9UGK8 458 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 HSPB6O14558 160 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 ZNF429Q86V71 674 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 THNSL2Q86YJ6 484 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 CISD2Q8N5K1 135 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 PGLYRP3Q96LB9 341 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 FBXL17Q9UF56 701 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 HSD17B6O14756 317 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 CDS2O95674 445 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 NOVA1P51513 510 aaKnown RBP10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 COL9A2Q14055 689 aaPredicted RBP10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 FBXL14Q8N1E6 418 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 RNF133Q8WVZ7 376 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 FBXO34Q9NWN3 711 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 EIF3IQ13347 325 aaKnown RBP10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 TESK1Q15569 626 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 DENND4CQ5VZ89 1909 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 P2RY1P47900 373 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 ELLP55199 621 aaPredicted RBP10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 IL11RAQ14626 422 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 BTNL8Q6UX41 500 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 OR4D10Q8NGI6 311 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 CHRDL1Q9BU40 450 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 CYTIPO60759 359 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 NAT1P18440 290 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 SUB1P53999 127 aaKnown RBP eCLIP10.51□□□□□ -0.738e-6■■■□□ 15.4
CDC42BPA-202ENST00000366764 RPS23P62266 143 aaKnown RBP10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 ROM1Q03395 351 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 KDF1Q8NAX2 398 aaPredicted RBP10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 PISDQ9UG56 409 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 SF3B6Q9Y3B4 125 aaKnown RBP10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 TIGITQ495A1 244 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 PATZ1Q9HBE1 687 aaKnown RBP10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 DUXBA0A1W2PPF3 345 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 LRRC30A6NM36 301 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 FGF7P21781 194 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 CTGFP29279 349 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 SEC14L6B5MCN3 397 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 CLDN34H7C241 214 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 RPS4Y1P22090 263 aaKnown RBP10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 IL24Q13007 206 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 BATFQ16520 125 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 NGBQ9NPG2 151 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 ANXA10Q9UJ72 324 aa10.51□□□□□ -0.73
CDC42BPA-202ENST00000366764 GABRG2P18507 467 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 OR2C3Q8N628 320 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 CNEP1R1Q8N9A8 125 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 UBE2ZQ9H832 354 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 DNPH1O43598 174 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 LYPD8Q6UX82 237 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 TSEN54Q7Z6J9 526 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 RXFP4Q8TDU9 374 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 NPDC1Q9NQX5 325 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 RCL1Q9Y2P8 373 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 OR2A4O95047 310 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 OR2A7Q96R45 310 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 CLEC18AA5D8T8 446 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 MPPED1O15442 326 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 GPR12P47775 334 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 MESTQ5EB52 335 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 CLEC18CQ8NCF0 446 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 ASB5Q8WWX0 329 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 A0A1W2PNR3 127 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 OR13D1Q8NGV5 346 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 ARSGQ96EG1 525 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 TAAR6Q96RI8 345 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 ALPK3Q96L96 1907 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 ZNF732B4DXR9 585 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 GREM1O60565 184 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 CT62P0C5K7 136 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 RAB32Q13637 225 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 FAM74A3Q4VXF1 159 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 SDHCQ99643 169 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 TNFSF12O43508 249 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 TMEM33P57088 247 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 ABHD14BQ96IU4 210 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 PRSS27Q9BQR3 290 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 SOX7Q9BT81 388 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 PSENENQ9NZ42 101 aa10.5□□□□□ -0.73
CDC42BPA-202ENST00000366764 TRAV8-7A0A075B6U6 113 aa10.49□□□□□ -0.73
CDC42BPA-202ENST00000366764 OR8G1Q15617 311 aa10.49□□□□□ -0.73
CDC42BPA-202ENST00000366764 ZNF574Q6ZN55 896 aaPredicted RBP10.49□□□□□ -0.73
CDC42BPA-202ENST00000366764 ZPBPQ9BS86 351 aa10.49□□□□□ -0.73
CDC42BPA-202ENST00000366764 FDX2Q6P4F2 183 aa10.49□□□□□ -0.73
CDC42BPA-202ENST00000366764 SPEM1Q8N4L4 309 aa10.49□□□□□ -0.73
CDC42BPA-202ENST00000366764 CALHM2Q9HA72 323 aa10.49□□□□□ -0.73
CDC42BPA-202ENST00000366764 ZNF331Q9NQX6 463 aaPredicted RBP10.49□□□□□ -0.73
CDC42BPA-202ENST00000366764 PPP1CBP62140 327 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms