RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 FAAP24Q9BTP7 215 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 DOK5Q9P104 306 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 TRBV5-7A0A0A0MS05 114 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 ARGFXA6NJG6 315 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 EIF1BO60739 113 aaKnown RBP14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 DDTP30046 118 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 C9orf135Q5VTT2 229 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 FAM58AQ8N1B3 248 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 PITPNC1Q9UKF7 332 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 A0A1B0GV90 55 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 CD74P04233 296 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 GALR1P47211 349 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 P2RY1P47900 373 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 TMEM241Q24JQ0 296 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 SLC25A43Q8WUT9 341 aaPredicted RBP14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 PSENENQ9NZ42 101 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 YBX2Q9Y2T7 364 aaKnown RBP14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 ANK1P16157 1881 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 TRAV14DV4A0A0A6YYC5 116 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 RER1O15258 196 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 NRASP01111 189 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 PMP22Q01453 160 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 SHBQ15464 509 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 MAML2Q8IZL2 1156 aaPredicted RBP14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 SLC26A10Q8NG04 563 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 AMELYQ99218 206 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 VPS25Q9BRG1 176 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 GPR61Q9BZJ8 451 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 ACTR3CQ9C0K3 210 aaPredicted RBP14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 FGF21Q9NSA1 209 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 CDX1P47902 265 aaPredicted RBP14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 LIMK1P53667 647 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 RANP62826 216 aaKnown RBP14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 C20orf196Q8IYI0 205 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 FBXL14Q8N1E6 418 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 SIGLECL1Q8N7X8 197 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 AQP10Q96PS8 301 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 RNF222A6NCQ9 220 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 H0YIG0 161 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 PGA3P0DJD8 388 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 OR10A7Q8NGE5 316 aa14.19□□□□□ -0.14
CLSTN1-201ENST00000361311 LILRA6Q6PI73 481 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 HOGA1Q86XE5 327 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 SLC25A28Q96A46 364 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 FAM103A1Q9BTL3 118 aaKnown RBP14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 VAMP8Q9BV40 100 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 KCNE5Q9UJ90 142 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 NYNRINQ9P2P1 1898 aaKnown RBP14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 HRKO00198 91 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 CLN5O75503 358 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 CXCL10P02778 98 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 TRGC2P03986 189 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 RPS11P62280 158 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 ZNF260Q3ZCT1 412 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 OSR2Q8N2R0 312 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 B4DEV8 164 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 ADAM20O43506 726 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 WDR1O75083 606 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 EFNB1P98172 346 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 ACER2Q5QJU3 275 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 IP6K3Q96PC2 410 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 GPR132Q9UNW8 380 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 AUP1Q9Y679 476 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 C4orf47A7E2U8 309 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 NPIPB9F8W1W9 429 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 PLPP3O14495 311 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 NGFRP08138 427 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 ERGP11308 486 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 FOXF1Q12946 379 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 LHFPL2Q6ZUX7 228 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 SLC35G3Q8N808 338 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 CPT1CQ8TCG5 803 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 PECRQ9BY49 303 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 ANXA10Q9UJ72 324 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 TRAPPC1Q9Y5R8 145 aa14.18□□□□□ -0.14
CLSTN1-201ENST00000361311 TDRD15B5MCY1 1934 aaKnown RBP14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 LRP5LA4QPB2 252 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 G3V3Y1 287 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 CYR61O00622 381 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 PLRG1O43660 514 aaKnown RBP14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 HEXAP06865 529 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 DRD3P35462 400 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 ERVS71-1P61550 626 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 FZD2Q14332 565 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 BTNL8Q6UX41 500 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 TMEM52Q8NDY8 209 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 PINX1Q96BK5 328 aaKnown RBP14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 PRF1P14222 555 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 KRTDAPP60985 99 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 MAP1LC3B2A6NCE7 125 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 GREM1O60565 184 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 FBP1P09467 338 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 COX5AP20674 150 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 NTF3P20783 257 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 APLNRP35414 380 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 TPPP2P59282 170 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 PPP1CBP62140 327 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 SUMO1P63165 101 aaKnown RBP14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 HIST1H3AP68431 136 aa14.17□□□□□ -0.14
CLSTN1-201ENST00000361311 PHYHD1Q5SRE7 291 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms