RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 AKIRIN2Q53H80 203 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 WIPI1Q5MNZ9 446 aaPredicted RBP16.3■□□□□ 0.2
SNX11-201ENST00000359238 FIP1L1Q6UN15 594 aaKnown RBP16.3■□□□□ 0.2
SNX11-201ENST00000359238 BTNL8Q6UX41 500 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 ZNF584Q8IVC4 421 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 UEVLDQ8IX04 471 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 TSEN15Q8WW01 171 aaKnown RBP16.3■□□□□ 0.2
SNX11-201ENST00000359238 MRGPRFQ96AM1 343 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 KIRREL1Q96J84 757 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 ZNF385AQ96PM9 386 aaKnown RBP16.3■□□□□ 0.2
SNX11-201ENST00000359238 OR8B4Q96RC9 309 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 AQP7P3A6NL99 342 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 HSPB2A8KAH6 182 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 C9JQL5 133 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 CSN2P05814 226 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 CELA3AP09093 270 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 ACKR3P25106 362 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 LAP3P28838 519 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 SERPINF1P36955 418 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 LPAR6P43657 344 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 SUCLG1P53597 346 aaKnown RBP16.3■□□□□ 0.2
SNX11-201ENST00000359238 DVL1P1P54792 670 aaPredicted RBP16.3■□□□□ 0.2
SNX11-201ENST00000359238 CLDN15P56746 228 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 EIF2B1Q14232 305 aaKnown RBP16.3■□□□□ 0.2
SNX11-201ENST00000359238 HSPB2Q16082 182 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 RNASE10Q5GAN6 216 aaKnown RBP16.3■□□□□ 0.2
SNX11-201ENST00000359238 WDR38Q5JTN6 314 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 PHYHD1Q5SRE7 291 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 CASTOR1Q8WTX7 329 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 C4orf45Q96LM5 186 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 DCBLD2Q96PD2 775 aa16.3■□□□□ 0.2
SNX11-201ENST00000359238 NKX3-1Q99801 234 aaPredicted RBP16.3■□□□□ 0.2
SNX11-201ENST00000359238 ATMQ13315 3056 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 A0A087WZY1 265 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 C13orf42A0A1B0GVH6 325 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 A6NLC8 198 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 CD2P06729 351 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 LYL1P12980 280 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 CD80P33681 288 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 RAB5CP51148 216 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 DEFA6Q01524 100 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 GLO1Q04760 184 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 EGR3Q06889 387 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 PMPCAQ10713 525 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 C9orf152Q5JTZ5 239 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 OPA3Q9H6K4 179 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 H0YIZ8 118 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 EFSO43281 561 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 VAMP1P23763 118 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 NTF4P34130 210 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 AKR1C3P42330 323 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 OR1C1Q15619 314 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 EIF5AL1Q6IS14 154 aaKnown RBP16.29■□□□□ 0.2
SNX11-201ENST00000359238 DCXRQ7Z4W1 244 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 CD163Q86VB7 1156 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 RSRP1Q9BUV0 290 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 HDGFL3Q9Y3E1 203 aa16.29■□□□□ 0.2
SNX11-201ENST00000359238 METTL21EPA6NDL7 271 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 ERCC1P07992 297 aaPredicted RBP16.28■□□□□ 0.2
SNX11-201ENST00000359238 SELLP14151 372 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 EIF5AP63241 154 aaKnown RBP16.28■□□□□ 0.2
SNX11-201ENST00000359238 SLC17A1Q14916 467 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 HYAL4Q2M3T9 481 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 OR4S1Q8NGB4 309 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 ST7LQ8TDW4 575 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 SLC25A43Q8WUT9 341 aaPredicted RBP16.28■□□□□ 0.2
SNX11-201ENST00000359238 C11orf40Q8WZ69 217 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 AKR1E2Q96JD6 320 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 TOLLIPQ9H0E2 274 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 UFSP2Q9NUQ7 469 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 ABI3Q9P2A4 366 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 LRP12Q9Y561 859 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 A6NIZ1 184 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 MED6O75586 246 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 TRAPPC6AO75865 159 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 HTR2CP28335 458 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 CRABP1P29762 137 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 CLDN17P56750 224 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 RAP1BP61224 184 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 RAP1AP62834 184 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 GGNQ86UU5 652 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 OR10S1Q8NGN2 331 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 OR14L1PQ8NHC6 308 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 GTF3AQ92664 365 aaKnown RBP16.28■□□□□ 0.2
SNX11-201ENST00000359238 AQP10Q96PS8 301 aa16.28■□□□□ 0.2
SNX11-201ENST00000359238 A0A1W2PPH5 198 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 C7orf77A4D0Y5 90 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 MSGN1A6NI15 193 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 NPIPB13A6NJU9 1138 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 NPIPB4C9JG80 1138 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 SLC34A2O95436 690 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 NHLH1Q02575 133 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 KRBOX4Q5JUW0 171 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 ASPHD2Q6ICH7 369 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 FDX2Q6P4F2 183 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 PRSS54Q6PEW0 395 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 PLPP7Q8NBV4 271 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 ADAD2Q8NCV1 583 aaKnown RBP16.27■□□□□ 0.2
SNX11-201ENST00000359238 OXGR1Q96P68 337 aa16.27■□□□□ 0.2
SNX11-201ENST00000359238 PARP11Q9NR21 331 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms