RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 SEZ6L2Q6UXD5 910 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 SKA3Q8IX90 412 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 PNPLA2Q96AD5 504 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 FAM3DQ96BQ1 224 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 ARL6Q9H0F7 186 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 GPR35Q9HC97 309 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 CKLFQ9UBR5 152 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 PCDHB10Q9UN67 800 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 NUBP2Q9Y5Y2 271 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 LSM6P62312 80 aaKnown RBP11.03□□□□□ -0.64
GGPS1-202ENST00000358966 SLC36A2Q495M3 483 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 TMEM69Q5SWH9 247 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 TMEM244Q5VVB8 128 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF660Q6AZW8 331 aaPredicted RBP11.03□□□□□ -0.64
GGPS1-202ENST00000358966 C16orf54Q6UWD8 224 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 GJC3Q8NFK1 279 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 OR5D18Q8NGL1 313 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 OR52I2Q8NH67 350 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 S100PBPQ96BU1 408 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 TMPRSS5Q9H3S3 457 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 FOXJ3Q9UPW0 622 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 TRGV5A0A0B4J1U4 118 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 TMEM272A0A1B0GTI8 110 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 M0R135 149 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 UBL3O95164 117 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 SPDEFO95238 335 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 OR8U8P0C7N1 319 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 NQO2P16083 231 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 ADCYAP1P18509 176 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 GIFP27352 417 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 NPBWR1P48145 328 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 PTH2RP49190 550 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 DHODHQ02127 395 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 GUCA2AQ02747 115 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 TMEM255AQ5JRV8 349 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 ELFN2Q5R3F8 820 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 GSG1LQ6UXU4 331 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF813Q6ZN06 617 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 TMUB2Q71RG4 321 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 FGD2Q7Z6J4 655 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF799Q96GE5 643 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 PGAM5Q96HS1 289 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 METTL9Q9H1A3 318 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 CNTD2Q9H8S5 307 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 RCE1Q9Y256 329 aa11.03□□□□□ -0.64
GGPS1-202ENST00000358966 ARPC5O15511 151 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 MT-ND4P03905 459 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 PPP3CBP16298 524 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 FAHP16930 419 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF133P52736 654 aaPredicted RBP11.02□□□□□ -0.64
GGPS1-202ENST00000358966 MRPS34P82930 218 aaKnown RBP11.02□□□□□ -0.64
GGPS1-202ENST00000358966 RAB11BQ15907 218 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 FAM27BQ5VT28 67 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 FOXL2NBQ6ZUU3 175 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 SIAH3Q8IW03 269 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 SLC22A24Q8N4F4 322 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 TMEM178AQ8NBL3 297 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 TMEM185AQ8NFB2 350 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 SLCO5A1Q9H2Y9 848 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 PRSS50Q9UI38 385 aa11.02□□□□□ -0.64
GGPS1-202ENST00000358966 MCTS1Q9ULC4 181 aaKnown RBP11.02□□□□□ -0.64
GGPS1-202ENST00000358966 A0A1B0GW55 424 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 TMEM218A2RU14 115 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 SYNGR4O95473 234 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 HLA-HP01893 362 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 DUX4L2P0CJ85 424 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 DUX4L3P0CJ86 424 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 DUX4L4P0CJ87 422 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 DUX4L5P0CJ88 424 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 DUX4L6P0CJ89 424 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 DUX4L7P0CJ90 424 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 NFYBP25208 207 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 HTR2CP28335 458 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 ART1P52961 327 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 PSG4Q00888 419 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 MOGAT2Q3SYC2 334 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 CDNFQ49AH0 187 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 PYY3Q5JQD4 70 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 SLC16A14Q7RTX9 510 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 WDYHV1Q96HA8 205 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 UNKLQ9H9P5 680 aaKnown RBP11.02□□□□□ -0.65
GGPS1-202ENST00000358966 DUX4Q9UBX2 424 aa11.02□□□□□ -0.65
GGPS1-202ENST00000358966 A0A1W2PP11 408 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 ACOT7O00154 380 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 SLC17A2O00624 439 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 CCNOP22674 350 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 ARF1P84077 181 aaKnown RBP11.01□□□□□ -0.65
GGPS1-202ENST00000358966 USF2Q15853 346 aaPredicted RBP11.01□□□□□ -0.65
GGPS1-202ENST00000358966 NAXEQ8NCW5 288 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 SLC25A28Q96A46 364 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 HAVCR1Q96D42 359 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 CMBLQ96DG6 245 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 WDR89Q96FK6 387 aaPredicted RBP11.01□□□□□ -0.65
GGPS1-202ENST00000358966 RSRP1Q9BUV0 290 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 GPR61Q9BZJ8 451 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 NOX3Q9HBY0 568 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 GFOD1Q9NXC2 390 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 CDV3Q9UKY7 258 aaKnown RBP11.01□□□□□ -0.65
GGPS1-202ENST00000358966 COLCA2A8K830 154 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 CTAG2O75638 210 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms