RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 TAF9Q16594 264 aa7.5□□□□□ -1.21
RFX3-202ENST00000358730 FAM27BQ5VT28 67 aa7.5□□□□□ -1.21
RFX3-202ENST00000358730 NSUN5P2Q63ZY6 315 aa7.5□□□□□ -1.21
RFX3-202ENST00000358730 RPL7L1Q6DKI1 246 aaKnown RBP7.5□□□□□ -1.21
RFX3-202ENST00000358730 H3F3CQ6NXT2 135 aa7.5□□□□□ -1.21
RFX3-202ENST00000358730 RPUSD3Q6P087 351 aaKnown RBP7.5□□□□□ -1.21
RFX3-202ENST00000358730 PLXDC2Q6UX71 529 aa7.5□□□□□ -1.21
RFX3-202ENST00000358730 C20orf196Q8IYI0 205 aa7.5□□□□□ -1.21
RFX3-202ENST00000358730 SPSB1Q96BD6 273 aa7.5□□□□□ -1.21
RFX3-202ENST00000358730 REEP6Q96HR9 211 aa7.5□□□□□ -1.21
RFX3-202ENST00000358730 ALKBH3Q96Q83 286 aaPredicted RBP7.5□□□□□ -1.21
RFX3-202ENST00000358730 TAF9BQ9HBM6 251 aa7.5□□□□□ -1.21
RFX3-202ENST00000358730 ANXA10Q9UJ72 324 aa7.5□□□□□ -1.21
RFX3-202ENST00000358730 NSG1A0A0A6YYJ2 146 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 NUDT19A8MXV4 375 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 RRP8O43159 456 aaKnown RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 LRP3O75074 770 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 KLF7O75840 302 aaPredicted RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 CCL4P13236 92 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 CRYGSP22914 178 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 RAC1P63000 192 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 EIF5AP63241 154 aaKnown RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 IL15RAQ13261 267 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 RAB35Q15286 201 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 ZNF774Q6NX45 483 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 HAGHLQ6PII5 290 aaPredicted RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 IL34Q6ZMJ4 242 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 Q6ZSR3 168 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 RPS19BP1Q86WX3 136 aaKnown RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 LDLRAD3Q86YD5 345 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 CCDC54Q8NEL0 328 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 OR5T2Q8NGG2 359 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 TOMM40LQ969M1 308 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 CNTNAP3BQ96NU0 1288 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 METTL9Q9H1A3 318 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 ZNF581Q9P0T4 197 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 PADI1Q9ULC6 663 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 GJE1A6NN92 205 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 MSTNO14793 375 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 MED6O75586 246 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 F12P00748 615 aaPredicted RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 CTSDP07339 412 aaPredicted RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 OR5H8P0DN80 308 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 HKR1P10072 659 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 B4GALT1P15291 398 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 ZNF708P17019 499 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 OPRM1P35372 400 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 HGFACQ04756 655 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 PJVKQ0ZLH3 352 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 SMCO1Q147U7 214 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 CNN3Q15417 329 aaKnown RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 MST1LQ2TV78 715 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 ZNF468Q5VIY5 522 aaPredicted RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 PMS2CLQ68D20 193 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 OR2A2Q6IF42 318 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 EIF5AL1Q6IS14 154 aaKnown RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 CBLN2Q8IUK8 224 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 GPR137CQ8N3F9 429 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 AGBL5Q8NDL9 886 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 M1APQ8TC57 530 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 HLA-CQ95604 372 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 INTS12Q96CB8 462 aaKnown RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 CPNE2Q96FN4 548 aaPredicted RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 FAAP24Q9BTP7 215 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 TLNRD1Q9H1K6 362 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 CRLF2Q9HC73 371 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 SH2D2AQ9NP31 389 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 AK3Q9UIJ7 227 aa7.49□□□□□ -1.21
RFX3-202ENST00000358730 TNRC6BQ9UPQ9 1833 aaKnown RBP7.49□□□□□ -1.21
RFX3-202ENST00000358730 CCDC187A0A096LP49 1063 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 CRYM-AS1A6NIL9 109 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 ZNF850A8MQ14 1090 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 K7EPK0 472 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 SYNGR3O43761 229 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 CBR3O75828 277 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 FARS2O95363 451 aaKnown RBP7.48□□□□□ -1.21
RFX3-202ENST00000358730 SCGB1D2O95969 90 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 LCATP04180 440 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 NME2P22392 152 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 IL32P24001 234 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 SUCLG1P53597 346 aaKnown RBP7.48□□□□□ -1.21
RFX3-202ENST00000358730 RRADP55042 308 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 YRDCQ86U90 279 aaKnown RBP7.48□□□□□ -1.21
RFX3-202ENST00000358730 SPAG16Q8N0X2 631 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 FAM71E2Q8N5Q1 922 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 OR2Y1Q8NGV0 311 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 DYRK2Q92630 601 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 CMSS1Q9BQ75 279 aaKnown RBP7.48□□□□□ -1.21
RFX3-202ENST00000358730 CNTNAP3Q9BZ76 1288 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 UQCC1Q9NVA1 299 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 PILRBQ9UKJ0 227 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 EDARQ9UNE0 448 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 CARHSP1Q9Y2V2 147 aaKnown RBP7.48□□□□□ -1.21
RFX3-202ENST00000358730 FAM96BQ9Y3D0 163 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 LSM5Q9Y4Y9 91 aaKnown RBP7.48□□□□□ -1.21
RFX3-202ENST00000358730 IGKV1-27A0A075B6S5 117 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 A0A0G2JMM0 328 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 A0A1W2PPB8 328 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 A0A1W2PRS3 328 aa7.48□□□□□ -1.21
RFX3-202ENST00000358730 KIR3DP1A8MWS1 328 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms