RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CHAC2Q8WUX2 184 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 PISDQ9UG56 409 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 PLRG1O43660 514 aaKnown RBP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 SMIM17P0DL12 118 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF121P58317 390 aaPredicted RBP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 PLAURQ03405 335 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 DPPA3Q6W0C5 159 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 RFLNAQ6ZTI6 216 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 OR2C3Q8N628 320 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 LILRA3Q8N6C8 439 aaPredicted RBP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 PIK3IP1Q96FE7 263 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 NAA60Q9H7X0 242 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 SLC22A13Q9Y226 551 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 SIGLEC7Q9Y286 467 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ZDBF2Q9HCK1 2354 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 MGAMO43451 1857 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 M0R2Z0 102 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 GDF1P27539 372 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 NR0B2Q15466 257 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 COX19Q49B96 90 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ZDHHC16Q969W1 377 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 APH1AQ96BI3 265 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 KIR3DX1Q9H7L2 352 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 LRP12Q9Y561 859 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 UPK1AO00322 258 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF217O75362 1048 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 AKR7A3O95154 331 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 C21orf58P58505 322 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 MAML2Q8IZL2 1156 aaPredicted RBP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 NDFIP1Q9BT67 221 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 NEU3Q9UQ49 428 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 A0A1W2PPE2 198 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 TTRP02766 147 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 HIST1H1DP16402 221 aaKnown RBP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 IRF3Q14653 427 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 AGERQ15109 404 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF468Q5VIY5 522 aaPredicted RBP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 FAM78BQ5VT40 261 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF573Q86YE8 665 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 CITED2Q99967 270 aaPredicted RBP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 DDA1Q9BW61 102 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ONECUT2O95948 504 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 IGLV3-25P01717 112 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 PPOXP50336 477 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ERVS71-1P61550 626 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 TIAL1Q01085 375 aaKnown RBP eCLIP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 FAAP24Q9BTP7 215 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 RAB33BQ9H082 229 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 POLDIP2Q9Y2S7 368 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF407Q9C0G0 2248 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 CXorf65A6NEN9 183 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ABCD4O14678 606 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 SH2D1BO14796 132 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 EDN3P14138 238 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 TBXA2RP21731 343 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 NAAAQ02083 359 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 HLA-BQ31612 363 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 PECRQ9BY49 303 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 LAT2Q9GZY6 243 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 TRBV5-4A0A0C4DH59 114 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 SURF2Q15527 256 aaPredicted RBP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 C17orf78Q8N4C9 275 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ATG101Q9BSB4 218 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 BARX1Q9HBU1 254 aaPredicted RBP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 AMDHD2Q9Y303 409 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 CNOT1A5YKK6 2376 aaKnown RBP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 MPTX1A8MV57 137 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 SIAH2O43255 324 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 CLN3Q13286 438 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 BSXQ3C1V8 233 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF385CQ66K41 422 aaPredicted RBP7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ETV3LQ6ZN32 361 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ST8SIA1Q92185 356 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 TAAR6Q96RI8 345 aa7.88□□□□□ -1.15
COL6A6-201ENST00000358511 ADAM20O43506 726 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 PTP4A3O75365 173 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 VAMP5O95183 116 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 GLRA1P23415 457 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 SSR4P51571 173 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 PMP22Q01453 160 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 LYSMD4Q5XG99 296 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 OR4A47Q6IF82 309 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 ATOH1Q92858 354 aaPredicted RBP7.87□□□□□ -1.15
COL6A6-201ENST00000358511 NOSIPQ9Y314 301 aaKnown RBP7.87□□□□□ -1.15
COL6A6-201ENST00000358511 WASHC3Q9Y3C0 194 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 SPTAN1Q13813 2472 aaKnown RBP7.87□□□□□ -1.15
COL6A6-201ENST00000358511 PPM1DO15297 605 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 FCMRO60667 390 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 BTNL3Q6UXE8 466 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 C11orf42Q8N5U0 333 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 ARHGAP5-AS1Q96IT6 56 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 SIGLEC11Q96RL6 698 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 PRSS50Q9UI38 385 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 FUT9Q9Y231 359 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 A0A0B4J2E0 115 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 A0A1B0GX12 115 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 OR5AC1P0C628 307 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 CD1CP29017 333 aa7.87□□□□□ -1.15
COL6A6-201ENST00000358511 PCBP3P57721 371 aaKnown RBP7.87□□□□□ -1.15
COL6A6-201ENST00000358511 KLHDC9Q8NEP7 349 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms