RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 C1QTNF6Q9BXI9 259 aa11.53□□□□□ -0.56
SMC4-202ENST00000357388 VAX2Q9UIW0 290 aa11.53□□□□□ -0.56
SMC4-202ENST00000357388 C3orf85A0A1B0GTC6 90 aa11.52□□□□□ -0.56
SMC4-202ENST00000357388 HMX2A2RU54 273 aa11.52□□□□□ -0.56
SMC4-202ENST00000357388 ADAM20O43506 726 aa11.52□□□□□ -0.56
SMC4-202ENST00000357388 HRO43593 1189 aa11.52□□□□□ -0.56
SMC4-202ENST00000357388 RPS4Y1P22090 263 aaKnown RBP11.52□□□□□ -0.56
SMC4-202ENST00000357388 PTGFRP43088 359 aa11.52□□□□□ -0.56
SMC4-202ENST00000357388 HAAOP46952 286 aa11.52□□□□□ -0.56
SMC4-202ENST00000357388 DPTQ07507 201 aa11.52□□□□□ -0.56
SMC4-202ENST00000357388 TMEM267Q0VDI3 215 aaPredicted RBP11.52□□□□□ -0.56
SMC4-202ENST00000357388 OTOSQ8NHW6 89 aa11.52□□□□□ -0.56
SMC4-202ENST00000357388 ST6GAL2Q96JF0 529 aa11.52□□□□□ -0.56
SMC4-202ENST00000357388 LRRC37A3O60309 1634 aa11.52□□□□□ -0.56
SMC4-202ENST00000357388 TMEM238LA0A1B0GVL6 79 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 A0A1W2PR48 441 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 A6NJY4 79 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 ZNF716A6NP11 495 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 PDE6DO43924 150 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 SULT1A1P50225 295 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 ZNF121P58317 390 aaPredicted RBP11.52□□□□□ -0.57
SMC4-202ENST00000357388 TUSC1Q2TAM9 212 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 OR2D3Q8NGH3 330 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 MAFAQ8NHW3 353 aaPredicted RBP11.52□□□□□ -0.57
SMC4-202ENST00000357388 EMC6Q9BV81 110 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 NRSN2Q9GZP1 204 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 TRGV10A0A0A0MS01 117 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 TRAV17A0A0B4J275 112 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 ONECUT2O95948 504 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 PGA4P0DJD7 388 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 PGA5P0DJD9 388 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 ACAA2P42765 397 aaKnown RBP11.52□□□□□ -0.57
SMC4-202ENST00000357388 TIAL1Q01085 375 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMC4-202ENST00000357388 FOXO1Q12778 655 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 JMJD6Q6NYC1 403 aaPredicted RBP11.52□□□□□ -0.57
SMC4-202ENST00000357388 ATP5SQ99766 215 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 PRDM7Q9NQW5 492 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 PARP11Q9NR21 331 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 HDGFL3Q9Y3E1 203 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 FAM221AA4D161 298 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 PNLIPRP2P54317 469 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 RGS7BPQ6MZT1 257 aaPredicted RBP11.52□□□□□ -0.57
SMC4-202ENST00000357388 ROBO4Q8WZ75 1007 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 ELOVL1Q9BW60 279 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 ARRDC1-AS1Q9H2J1 176 aa11.52□□□□□ -0.57
SMC4-202ENST00000357388 C7orf77A4D0Y5 90 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 IFITM10A6NMD0 228 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 H3BP45 60 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 PRSS36Q5K4E3 855 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 OR1L6Q8NGR2 347 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 WBP2Q969T9 261 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 ZFP30Q9Y2G7 519 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 MYH7P12883 1935 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 TMEM272A0A1B0GTI8 110 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 OLIG3Q7RTU3 272 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 IGSF23A1L1A6 192 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 C5orf49A4QMS7 147 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 GCGP01275 180 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 CAPZBP47756 277 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 TMEM240Q5SV17 173 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 OR4A47Q6IF82 309 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 PAQR9Q6ZVX9 377 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 NOXO1Q8NFA2 376 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 OR4A4PQ8NGN8 299 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 BAHD1Q8TBE0 780 aaPredicted RBP11.51□□□□□ -0.57
SMC4-202ENST00000357388 TECRQ9NZ01 308 aaKnown RBP11.51□□□□□ -0.57
SMC4-202ENST00000357388 TMPRSS11DO60235 418 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 LRRC10Q5BKY1 277 aa11.51□□□□□ -0.57
SMC4-202ENST00000357388 FRG2CA6NGY1 282 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 CTSDP07339 412 aaPredicted RBP11.5□□□□□ -0.57
SMC4-202ENST00000357388 OR1C1Q15619 314 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 DEGS2Q6QHC5 323 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 ANKRD33Q7Z3H0 272 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 C9orf62Q8N4C0 152 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 APOBEC3DQ96AK3 386 aaPredicted RBP11.5□□□□□ -0.57
SMC4-202ENST00000357388 P4HTMQ9NXG6 502 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 WASHC3Q9Y3C0 194 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 ISLRO14498 428 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 SLC37A1P57057 533 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 FAM3BP58499 235 aaPredicted RBP11.5□□□□□ -0.57
SMC4-202ENST00000357388 FUT7Q11130 342 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 C1QTNF12Q5T7M4 302 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 SNX22Q96L94 193 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 PLEKHB1Q9UF11 243 aaPredicted RBP11.5□□□□□ -0.57
SMC4-202ENST00000357388 A0A1W2PPC4 97 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 DHHO43323 396 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 CXCL13O43927 109 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 CBR3O75828 277 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 GPR3P46089 330 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 SRSF9Q13242 221 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMC4-202ENST00000357388 UBE2V2Q15819 145 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 KHDC3LQ587J8 217 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 NSUN5P2Q63ZY6 315 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 TMEM211Q6ICI0 200 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 RFLNAQ6ZTI6 216 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 GRAMD2BQ96HH9 432 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 SPACA5Q96QH8 159 aa11.5□□□□□ -0.57
SMC4-202ENST00000357388 NDUFB3O43676 98 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms