RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 MGAT4AQ9UM21 535 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 OPRM1P35372 400 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 NPBWR2P48146 333 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 GPM6AP51674 278 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 MRPS10P82664 201 aaKnown RBP15.25■□□□□ 0.03
NPAS3-202ENST00000356141 RSU1Q15404 277 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 OR2T35Q8NGX2 323 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 CASTOR1Q8WTX7 329 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 DEDD2Q8WXF8 326 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 AQP3Q92482 292 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 ZNF488Q96MN9 340 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 ZDHHC11Q9H8X9 412 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 ACKR4Q9NPB9 350 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 LRP3O75074 770 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 SFTPBP07988 381 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 THBS4P35443 961 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 FAUP35544 74 aaKnown RBP15.25■□□□□ 0.03
NPAS3-202ENST00000356141 NBL1P41271 181 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 PCBD1P61457 104 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 MUC20Q8N307 709 aaPredicted RBP15.25■□□□□ 0.03
NPAS3-202ENST00000356141 C9orf106Q8NAJ2 232 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 KCNG3Q8TAE7 436 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 FAAP24Q9BTP7 215 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 TRAF4Q9BUZ4 470 aaPredicted RBP15.25■□□□□ 0.03
NPAS3-202ENST00000356141 TMPRSS13Q9BYE2 586 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 POLEQ07864 2286 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 PTPRQQ9UMZ3 2332 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 IGKV1-12A0A0C4DH73 117 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 C7orf66A4D0T2 115 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 IGKV1D-12P01611 117 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 IGLV3-1P01715 115 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 CSTBP04080 98 aaKnown RBP15.24■□□□□ 0.03
NPAS3-202ENST00000356141 S100A6P06703 90 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 AKR1C4P17516 323 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 CD82P27701 267 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 TAS2R19P59542 299 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 ACTBP60709 375 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 ACTG1P63261 375 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 RBMS2Q15434 407 aaKnown RBP15.24■□□□□ 0.03
NPAS3-202ENST00000356141 RNASE10Q5GAN6 216 aaKnown RBP15.24■□□□□ 0.03
NPAS3-202ENST00000356141 C11orf88Q6PI97 169 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 ZNF565Q8N9K5 539 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 BCO1Q9HAY6 547 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 ESPL1Q14674 2120 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 GOSR2O14653 212 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 ACTL6AO96019 429 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 NPY4RP50391 375 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 PER3P56645 1201 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 TMEM65Q6PI78 240 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 TMEM45BQ96B21 275 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 COPZ2Q9P299 210 aa15.24■□□□□ 0.03
NPAS3-202ENST00000356141 IGKV1D-8A0A087WSZ0 117 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 UBE2QL1A1L167 161 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 TTLL8A6PVC2 850 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 F8VVB4 439 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 F8VWA3 439 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 GEMIN2O14893 280 aaKnown RBP15.23■□□□□ 0.03
NPAS3-202ENST00000356141 RELQ04864 619 aaPredicted RBP15.23■□□□□ 0.03
NPAS3-202ENST00000356141 OR2T2Q6IF00 324 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 SLC25A26Q70HW3 274 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 MRPL21Q7Z2W9 205 aaKnown RBP15.23■□□□□ 0.03
NPAS3-202ENST00000356141 C7orf50Q9BRJ6 194 aaKnown RBP15.23■□□□□ 0.03
NPAS3-202ENST00000356141 EIF3KQ9UBQ5 218 aaKnown RBP15.23■□□□□ 0.03
NPAS3-202ENST00000356141 PLEKHA6Q9Y2H5 1048 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 HEATR1Q9H583 2144 aaKnown RBP15.23■□□□□ 0.03
NPAS3-202ENST00000356141 hCG_38984A0A1B0GV85 526 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 HIST1H1DP16402 221 aaKnown RBP15.23■□□□□ 0.03
NPAS3-202ENST00000356141 VAMP1P23763 118 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 RNPS1Q15287 305 aaKnown RBP15.23■□□□□ 0.03
NPAS3-202ENST00000356141 LRRC37A5PQ49AS3 106 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 DCAF12L2Q5VW00 463 aa15.23■□□□□ 0.03
NPAS3-202ENST00000356141 SCAND1P57086 179 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 GLDNQ6ZMI3 551 aaPredicted RBP15.22■□□□□ 0.03
NPAS3-202ENST00000356141 NLRC3Q7RTR2 1065 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 ADAD2Q8NCV1 583 aaKnown RBP15.22■□□□□ 0.03
NPAS3-202ENST00000356141 OR4K15Q8NH41 348 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 PP6455Q8WZ26 134 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 PLEKHJ1Q9NW61 149 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 TRAV17A0A0B4J275 112 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 OR2AT4A6NND4 320 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 BET1O15155 118 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 NDUFS6O75380 124 aaKnown RBP15.22■□□□□ 0.03
NPAS3-202ENST00000356141 ANXA3P12429 323 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 WNT5AP41221 380 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 TSPAN5P62079 268 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 BTN1A1Q13410 526 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 MICBQ29980 383 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 FBXW9Q5XUX1 488 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 FBXL14Q8N1E6 418 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 OR13C8Q8NGS7 320 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 MARCH1Q8TCQ1 289 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 SLAMF9Q96A28 289 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 CST11Q9H112 138 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 VSIG4Q9Y279 399 aa15.22■□□□□ 0.03
NPAS3-202ENST00000356141 TMEM82A0PJX8 343 aa15.21■□□□□ 0.03
NPAS3-202ENST00000356141 ZNF891A8MT65 544 aaPredicted RBP15.21■□□□□ 0.03
NPAS3-202ENST00000356141 NUPL2O15504 423 aaKnown RBP15.21■□□□□ 0.03
NPAS3-202ENST00000356141 CREBL2O60519 120 aaPredicted RBP15.21■□□□□ 0.03
NPAS3-202ENST00000356141 APOC1P02654 83 aa15.21■□□□□ 0.03
NPAS3-202ENST00000356141 IFNA6P05013 189 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms