RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 RPUSD3Q6P087 351 aaKnown RBP11.73□□□□□ -0.53
NCDN-201ENST00000356090 TMEM217Q8N7C4 229 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 RTN4IP1Q8WWV3 396 aaPredicted RBP11.73□□□□□ -0.53
NCDN-201ENST00000356090 MRPL38Q96DV4 380 aaKnown RBP11.73□□□□□ -0.53
NCDN-201ENST00000356090 SMIM8Q96KF7 97 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 ZNF581Q9P0T4 197 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 CA14Q9ULX7 337 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 TRBV6-7A0A0A0MS04 114 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 PHF1O43189 567 aaPredicted RBP11.73□□□□□ -0.53
NCDN-201ENST00000356090 ZNHIT1O43257 154 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 IGHMP01871 453 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 NHLH2Q02577 135 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 FAM209BQ5JX69 171 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 SKA3Q8IX90 412 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 AKR7LQ8NHP1 331 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 NEK7Q8TDX7 302 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 ZNF285Q96NJ3 590 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 DEFB126Q9BYW3 111 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 MAGT1Q9H0U3 335 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 C8orf33Q9H7E9 229 aaPredicted RBP11.73□□□□□ -0.53
NCDN-201ENST00000356090 DNAJB11Q9UBS4 358 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 MIOXQ9UGB7 285 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 AHCTF1Q8WYP5 2266 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 IGHV1OR21-1A0A087WYE8 117 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 NPIPA2E9PIF3 369 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 NPIPA3F8WFD2 350 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 PATE4P0C8F1 98 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 GLP1RP43220 463 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 NOVA1P51513 510 aaKnown RBP11.72□□□□□ -0.53
NCDN-201ENST00000356090 SLC25A24Q6NUK1 477 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 OPN5Q6U736 354 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.72□□□□□ -0.53
NCDN-201ENST00000356090 LYPD6Q86Y78 171 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 SLC38A9Q8NBW4 561 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 GPHA2Q96T91 129 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 B3GAT1Q9P2W7 334 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 OSGIN2Q9Y236 505 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 RFNGQ9Y644 331 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 FIGNL2A6NMB9 653 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 H3BMH7 237 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 HSPB6O14558 160 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 LCATP04180 440 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 SMAD4Q13485 552 aaKnown RBP11.72□□□□□ -0.53
NCDN-201ENST00000356090 UBE2V2Q15819 145 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 HAGHQ16775 308 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 MVB12AQ96EY5 273 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 BCL2L14Q9BZR8 327 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 TWSG1Q9GZX9 223 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 CDRT15L2A8MXV6 281 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 SPINK2P20155 84 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 IGFBP4P22692 258 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 SLC22A25Q6T423 547 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 ZFP62Q8NB50 900 aaPredicted RBP11.72□□□□□ -0.53
NCDN-201ENST00000356090 APCDD1LQ8NCL9 501 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 OR11L1Q8NGX0 322 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 OR6C1Q96RD1 312 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 SPSB2Q99619 263 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 OCSTAMPQ9BR26 566 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 ZNF442Q9H7R0 627 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 MOB1AQ9H8S9 216 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 LMAN1LQ9HAT1 526 aa11.72□□□□□ -0.53
NCDN-201ENST00000356090 KLF2Q9Y5W3 355 aaPredicted RBP11.72□□□□□ -0.53
NCDN-201ENST00000356090 CFAP54Q96N23 3096 aa11.71□□□□□ -0.53
NCDN-201ENST00000356090 GSK3AP49840 483 aa11.71□□□□□ -0.53
NCDN-201ENST00000356090 HERV-K104P61576 105 aa11.71□□□□□ -0.53
NCDN-201ENST00000356090 PPA1Q15181 289 aa11.71□□□□□ -0.53
NCDN-201ENST00000356090 SOHLH1Q5JUK2 328 aa11.71□□□□□ -0.53
NCDN-201ENST00000356090 ZNF561Q8N587 486 aa11.71□□□□□ -0.53
NCDN-201ENST00000356090 SUMF2Q8NBJ7 301 aa11.71□□□□□ -0.53
NCDN-201ENST00000356090 TCTEX1D2Q8WW35 142 aa11.71□□□□□ -0.53
NCDN-201ENST00000356090 C1orf147Q96MC9 270 aaPredicted RBP11.71□□□□□ -0.53
NCDN-201ENST00000356090 PQLC2LA1A4F0 135 aa11.71□□□□□ -0.54
NCDN-201ENST00000356090 ONECUT2O95948 504 aa11.71□□□□□ -0.54
NCDN-201ENST00000356090 H2AFB1P0C5Y9 115 aa11.71□□□□□ -0.54
NCDN-201ENST00000356090 PGA4P0DJD7 388 aa11.71□□□□□ -0.54
NCDN-201ENST00000356090 PGA3P0DJD8 388 aa11.71□□□□□ -0.54
NCDN-201ENST00000356090 CCNOP22674 350 aa11.71□□□□□ -0.54
NCDN-201ENST00000356090 DCDP81605 110 aaKnown RBP11.71□□□□□ -0.54
NCDN-201ENST00000356090 ECH1Q13011 328 aa11.71□□□□□ -0.54
NCDN-201ENST00000356090 GNMTQ14749 295 aa11.71□□□□□ -0.54
NCDN-201ENST00000356090 NKAIN1Q4KMZ8 207 aa11.71□□□□□ -0.54
NCDN-201ENST00000356090 LMO7DNF2Z398 122 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 M0R135 149 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 MBPP02686 304 aaPredicted RBP11.7□□□□□ -0.54
NCDN-201ENST00000356090 FCGR3AP08637 254 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 PPP1CCP36873 323 aaKnown RBP11.7□□□□□ -0.54
NCDN-201ENST00000356090 ZP4Q12836 540 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 C15orf54Q8N8G6 183 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 ZNF799Q96GE5 643 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 PARP11Q9NR21 331 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 C19orf12Q9NSK7 152 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 CACFD1Q9UGQ2 172 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 PMS2P1A4D2B8 440 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 C2CD4DB7Z1M9 353 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 MT-ND4LP03901 98 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 ZNF17P17021 662 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 MPZP25189 248 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 SULT1A1P50225 295 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 NDUFA6P56556 154 aa11.7□□□□□ -0.54
NCDN-201ENST00000356090 POLR2GP62487 172 aaKnown RBP eCLIP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms