RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PRRX2Q99811 253 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 BCO1Q9HAY6 547 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 IGHV1OR21-1A0A087WYE8 117 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 ANGPTL7O43827 346 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 PIAS2O75928 621 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 WNT11O96014 354 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 SRFP11831 508 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 RCC1P18754 421 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-202ENST00000355815 HFEQ30201 348 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 GUSBP11Q6P575 273 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 TDHQ8IZJ6 230 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 HGDQ93099 445 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 FAM210BQ96KR6 192 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 RBM14Q96PK6 669 aaKnown RBP12.53□□□□□ -0.4
SREBF1-202ENST00000355815 GPR84Q9NQS5 396 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 LRP12Q9Y561 859 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 LAMTOR5O43504 91 aa12.52□□□□□ -0.4
SREBF1-202ENST00000355815 CD79AP11912 226 aa12.52□□□□□ -0.4
SREBF1-202ENST00000355815 GNRHR2Q96P88 292 aa12.52□□□□□ -0.4
SREBF1-202ENST00000355815 ULBP2Q9BZM5 246 aa12.52□□□□□ -0.4
SREBF1-202ENST00000355815 RASL12Q9NYN1 266 aa12.52□□□□□ -0.4
SREBF1-202ENST00000355815 C1QL1O75973 258 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 TGFBR3Q03167 851 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 ZNF141Q15928 474 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 ZNF787Q6DD87 383 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 SYT13Q7L8C5 426 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 C20orf196Q8IYI0 205 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 OTOSQ8NHW6 89 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 SLAMF6Q96DU3 332 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 HAO2Q9NYQ3 351 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 IL11P20809 199 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 MSR1P21757 451 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 ID4P47928 161 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 TMEM33P57088 247 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 UBE2G2P60604 165 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 OVCH2Q7RTZ1 564 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 MRPL21Q7Z2W9 205 aaKnown RBP12.52□□□□□ -0.41
SREBF1-202ENST00000355815 YRDCQ86U90 279 aaKnown RBP12.52□□□□□ -0.41
SREBF1-202ENST00000355815 OR10G3Q8NGC4 313 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 UBALD1Q8TB05 177 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 BSCL2Q96G97 398 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-202ENST00000355815 SLC35B3Q9H1N7 401 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 SMOC1Q9H4F8 434 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 PARD6AQ9NPB6 346 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 ABI3Q9P2A4 366 aa12.52□□□□□ -0.41
SREBF1-202ENST00000355815 E5RGE8 158 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 NDUFS6O75380 124 aaKnown RBP12.51□□□□□ -0.41
SREBF1-202ENST00000355815 MUC1P15941 1255 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-202ENST00000355815 ANKRD16Q6P6B7 361 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 TXNIPQ9H3M7 391 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 ST6GALNAC2Q9UJ37 374 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 NSG2Q9Y328 171 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 MPDZO75970 2070 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 TMEM272A0A1B0GTI8 110 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 TUSC2O75896 110 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 MGAT2Q10469 447 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 MKXQ8IYA7 352 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 HLA-CQ95604 372 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 KCNIP1Q9NZI2 227 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 CCDC187A0A096LP49 1063 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 CXorf65A6NEN9 183 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 CST4P01036 141 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 P04436 131 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 SMIM10L1P0DMW3 83 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 AADACP22760 399 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 DUSP1P28562 367 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 H2BFSP57053 126 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 TSPO2Q5TGU0 170 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 NCR3LG1Q68D85 454 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 C19orf48Q6RUI8 117 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 C15orf54Q8N8G6 183 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 ZSCAN4Q8NAM6 433 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-202ENST00000355815 SMIM10Q96HG1 83 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 PGLYRP3Q96LB9 341 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 C4orf45Q96LM5 186 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 ARGFXA6NJG6 315 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 MASP2O00187 686 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 PIN1P1O15428 100 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 ZNHIT1O43257 154 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 ACAA1P09110 424 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-202ENST00000355815 PAX6P26367 422 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 HBG1P69891 147 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 HBG2P69892 147 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 GABREP78334 506 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 ZNF880Q6PDB4 577 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 ATG4DQ86TL0 474 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-202ENST00000355815 ZNF808Q8N4W9 903 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-202ENST00000355815 TMEM229BQ8NBD8 167 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 OR1N1Q8NGS0 311 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 RHBDD1Q8TEB9 315 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 PSMF1Q92530 271 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 PACRGQ96M98 296 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-202ENST00000355815 SPSB2Q99619 263 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 KLHDC3Q9BQ90 382 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 PIGLQ9Y2B2 252 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 LIPGQ9Y5X9 500 aa12.51□□□□□ -0.41
SREBF1-202ENST00000355815 XKRY2A2RUG3 117 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 G3V3Q6 166 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 EIF4E2O60573 245 aaKnown RBP12.5□□□□□ -0.41
SREBF1-202ENST00000355815 HTR5AP47898 357 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms