RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 PDCD1Q15116 288 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 KISS1Q15726 138 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 Q3ZCU0 254 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 FAM78BQ5VT40 261 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 TMEM116Q8NCL8 245 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 OR5M9Q8NGP3 310 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 HSD17B10Q99714 261 aaKnown RBP13.31□□□□□ -0.28
LMX1B-201ENST00000355497 KCNE3Q9Y6H6 103 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 TRBV5-4A0A0C4DH59 114 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 HERVK_113P61574 105 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 IL13RA2Q14627 380 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 OR4C3Q8NH37 302 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 TMPRSS13Q9BYE2 586 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 TRGV5A0A0B4J1U4 118 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 GP1BAP07359 652 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 ST3GAL2Q16842 350 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 WDR38Q5JTN6 314 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 FDX2Q6P4F2 183 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 FBXL6Q8N531 539 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 NPEPL1Q8NDH3 523 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 OR10G4Q8NGN3 311 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 OR10G9Q8NGN4 311 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 OR10G7Q8NGN6 311 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 NAA60Q9H7X0 242 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 M0R2Z0 102 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 IGLV3-27P01718 113 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 BCL3P20749 454 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
LMX1B-201ENST00000355497 CCL7P80098 99 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 PPP1R1AQ13522 171 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 OR8D4Q8NGM9 314 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 IL22RA2Q969J5 263 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 NPAS1Q99742 590 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 DUXBA0A1W2PPF3 345 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 M0R143 59 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 DHRS3O75911 302 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 GPR3P46089 330 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 LSM11P83369 360 aaKnown RBP eCLIP13.3□□□□□ -0.28
LMX1B-201ENST00000355497 ZXDAP98168 799 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 RNPS1Q15287 305 aaKnown RBP13.3□□□□□ -0.28
LMX1B-201ENST00000355497 SPICQ8N5J4 248 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 UBALD1Q8TB05 177 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 RNF2Q99496 336 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 PCDHGA9Q9Y5G4 932 aaKnown RBP13.3□□□□□ -0.28
LMX1B-201ENST00000355497 CEACAM5P06731 702 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 PTHLHP12272 177 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 RPL29P47914 159 aaKnown RBP13.3□□□□□ -0.28
LMX1B-201ENST00000355497 CTF1Q16619 201 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 MRM1Q6IN84 353 aaKnown RBP13.3□□□□□ -0.28
LMX1B-201ENST00000355497 FAM24BQ8N5W8 94 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 OR5A2Q8NGI9 324 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 LILRB1Q8NHL6 650 aaPredicted RBP13.3□□□□□ -0.28
LMX1B-201ENST00000355497 PIK3IP1Q96FE7 263 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 TMEM208Q9BTX3 173 aa13.3□□□□□ -0.28
LMX1B-201ENST00000355497 RTN4RL1Q86UN2 441 aaPredicted RBP13.29□□□□□ -0.28
LMX1B-201ENST00000355497 WDR31Q8NA23 367 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 OR1L1Q8NH94 360 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 SCMH1Q96GD3 660 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 OR2D2Q9H210 308 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 TMEM9BQ9NQ34 198 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 A0A0B4J2E0 115 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 A0A1B0GX12 115 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 SHISA8B8ZZ34 492 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 CA6P23280 308 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 RAB32Q13637 225 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 ATP6V1FQ16864 119 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 TMEM215Q68D42 235 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 Q6ZN92 141 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 ZNF788Q6ZQV5 615 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.29□□□□□ -0.28
LMX1B-201ENST00000355497 C20orf196Q8IYI0 205 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 MUC20Q8N307 709 aaPredicted RBP13.29□□□□□ -0.28
LMX1B-201ENST00000355497 DUSP18Q8NEJ0 188 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 VN1R1Q9GZP7 353 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 NARFLQ9H6Q4 476 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 SLC25A22Q9H936 323 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 PTGFRP43088 359 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 PRRX1P54821 245 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 GPX7Q96SL4 187 aaPredicted RBP13.29□□□□□ -0.28
LMX1B-201ENST00000355497 MSL2Q9HCI7 577 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 SH2D2AQ9NP31 389 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 DOK5Q9P104 306 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 CACNG5Q9UF02 275 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 RALYQ9UKM9 306 aaKnown RBP13.29□□□□□ -0.28
LMX1B-201ENST00000355497 H3BMH7 237 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 CDC14BO60729 498 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 EPPINO95925 133 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 SPINK9Q5DT21 86 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 WIPI1Q5MNZ9 446 aaPredicted RBP13.29□□□□□ -0.28
LMX1B-201ENST00000355497 ETV3LQ6ZN32 361 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 NWD2Q9ULI1 1742 aa13.29□□□□□ -0.28
LMX1B-201ENST00000355497 LYZP61626 148 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 DHRS2Q13268 280 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 Q7L0L9 218 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 Q9N2K0 584 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 SLC7A10Q9NS82 523 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 PPIL1Q9Y3C6 166 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 UFC1Q9Y3C8 167 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 K7ESF4 209 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms