RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 MT-ATP6P00846 226 aa8.89□□□□□ -0.99
SYNE1-203ENST00000354674 CD74P04233 296 aa8.89□□□□□ -0.99
SYNE1-203ENST00000354674 OR4A8P0C604 315 aa8.89□□□□□ -0.99
SYNE1-203ENST00000354674 SELEP16581 610 aa8.89□□□□□ -0.99
SYNE1-203ENST00000354674 EDNRAP25101 427 aa8.89□□□□□ -0.99
SYNE1-203ENST00000354674 DHRS2Q13268 280 aa8.89□□□□□ -0.99
SYNE1-203ENST00000354674 LRRC75AQ8NAA5 344 aa8.89□□□□□ -0.99
SYNE1-203ENST00000354674 KCNE4Q8WWG9 221 aa8.89□□□□□ -0.99
SYNE1-203ENST00000354674 FOXJ3Q9UPW0 622 aa8.89□□□□□ -0.99
SYNE1-203ENST00000354674 VDAC3Q9Y277 283 aa8.89□□□□□ -0.99
SYNE1-203ENST00000354674 FTCDNL1E5RQL4 147 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 GLCEO94923 617 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 SPINK2P20155 84 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 C1orf140Q5VVS0 124 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 C1QL3Q5VWW1 255 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 RPL7L1Q6DKI1 246 aaKnown RBP8.88□□□□□ -0.99
SYNE1-203ENST00000354674 SPINK14Q6IE38 97 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 Q6ZVH6 145 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 HIST3H2BBQ8N257 126 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 ZNF610Q8N9Z0 462 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 HAS2Q92819 552 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 GNRHR2Q96P88 292 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 POTEKPQ9BYX7 375 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 LPAR3Q9UBY5 353 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 OR5V1Q9UGF6 321 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 RCL1Q9Y2P8 373 aaKnown RBP8.88□□□□□ -0.99
SYNE1-203ENST00000354674 AKAP13Q12802 2813 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 A0A1B0GTH9 108 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 KDM4EB2RXH2 506 aaPredicted RBP8.88□□□□□ -0.99
SYNE1-203ENST00000354674 SEC14L6B5MCN3 397 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 CD79AP11912 226 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 ZNF17P17021 662 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 FKBP2P26885 142 aaKnown RBP8.88□□□□□ -0.99
SYNE1-203ENST00000354674 DNASE1L1P49184 302 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 PRPS1P60891 318 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 OR1C1Q15619 314 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 OR51A7Q8NH64 312 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 FAAP24Q9BTP7 215 aa8.88□□□□□ -0.99
SYNE1-203ENST00000354674 NAP1L6A6NFF2 107 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 G3V3Y1 287 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 NDUFB2O95178 105 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 FAM157CP0CG43 387 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 BMP7P18075 431 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 PI3P19957 117 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 CD33P20138 364 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 S100A10P60903 97 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 CXADRP78310 365 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 MRPS11P82912 194 aaKnown RBP8.87□□□□□ -0.99
SYNE1-203ENST00000354674 SLC10A1Q14973 349 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 OR52L1Q8NGH7 329 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 DDIT4LQ96D03 193 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 FAM173AQ9BQD7 235 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 STEAP1Q9UHE8 339 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 ADAM18Q9Y3Q7 739 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 PINLYPA6NC86 204 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 ACOT7O00154 380 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 GSTZ1O43708 216 aaPredicted RBP8.87□□□□□ -0.99
SYNE1-203ENST00000354674 IFNGP01579 166 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 PGA4P0DJD7 388 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 PGA5P0DJD9 388 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 SRMP19623 302 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 IL11P20809 199 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 DPP4P27487 766 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 SRD5A2P31213 254 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 SLC6A6P31641 620 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 MNDAP41218 407 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 RPS23P62266 143 aaKnown RBP8.87□□□□□ -0.99
SYNE1-203ENST00000354674 SAPCD1Q5SSQ6 148 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 DPY19L2P2Q6ZN68 376 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 LINC00696Q6ZRV3 163 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 ZNF627Q7L945 461 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 MFSD8Q8NHS3 518 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 PGLYRP3Q96LB9 341 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 GFI1Q99684 422 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 SLC6A7Q99884 636 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 NRIP3Q9NQ35 241 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 PLA2G3Q9NZ20 509 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 ABRACLQ9P1F3 81 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 ZNF346Q9UL40 294 aaKnown RBP8.87□□□□□ -0.99
SYNE1-203ENST00000354674 GTF2A1LQ9UNN4 478 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 SHISA8B8ZZ34 492 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 ARPC3O15145 178 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 FGF16O43320 207 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 TRGC1P0CF51 173 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 KLK2P20151 261 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 HTR1FP30939 366 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 B3GALT5-AS1P59052 145 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 FOXK1P85037 733 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 ERASQ7Z444 233 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 OR2M7Q8NG81 312 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 OR51D1Q8NGF3 324 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 OR11A1Q9GZK7 315 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 CMC2Q9NRP2 79 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 KCNG2Q9UJ96 466 aa8.87□□□□□ -0.99
SYNE1-203ENST00000354674 IFITM5A6NNB3 132 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 DOK2O60496 412 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 TSPAN15O95858 294 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 SP1P08047 785 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 SGCBQ16585 318 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 FDCSPQ8NFU4 85 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms