RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 A0A0G2JK05 382 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 SMIM30A4D0T7 59 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 CCDC160A6NGH7 325 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 H3BMQ9 156 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 SLC22A1O15245 554 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 SYNGR1O43759 233 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 PLATP00750 562 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 COL8A2P25067 703 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 RBMXP38159 391 aaKnown RBP20.44■□□□□ 0.86
HMGA2-201ENST00000354636 PTGFRP43088 359 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 OR3A4PP47883 348 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 SERPINB10P48595 397 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 POU3F4P49335 361 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 HNRNPA0Q13151 305 aaKnown RBP20.44■□□□□ 0.86
HMGA2-201ENST00000354636 DEFB113Q30KQ7 82 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 SLC25A26Q70HW3 274 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 PNLDC1Q8NA58 520 aaKnown RBP20.44■□□□□ 0.86
HMGA2-201ENST00000354636 C12orf43Q96C57 262 aaKnown RBP20.44■□□□□ 0.86
HMGA2-201ENST00000354636 MBD6Q96DN6 1003 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 POLDIP2Q9Y2S7 368 aa20.44■□□□□ 0.86
HMGA2-201ENST00000354636 SPRY1O43609 319 aaPredicted RBP20.43■□□□□ 0.86
HMGA2-201ENST00000354636 RIN1Q13671 783 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 FAM166AQ6J272 317 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 USP43Q70EL4 1123 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 C1QL2Q7Z5L3 287 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 ZSCAN4Q8NAM6 433 aaPredicted RBP20.43■□□□□ 0.86
HMGA2-201ENST00000354636 OR4D6Q8NGJ1 314 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 ZNF671Q8TAW3 534 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 NDNFQ8TB73 568 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 TNFAIP8L1Q8WVP5 186 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 CCL17Q92583 94 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 DLL4Q9NR61 685 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 TMEM106BQ9NUM4 274 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 RSL24D1Q9UHA3 163 aaKnown RBP20.43■□□□□ 0.86
HMGA2-201ENST00000354636 hCG_1807616A0A1W2PRN6 198 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 NOTOA8MTQ0 251 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 LYNX1G3V0Z9 82 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 IFNL4K9M1U5 179 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 ZNF701M0R085 212 aaPredicted RBP20.43■□□□□ 0.86
HMGA2-201ENST00000354636 SLC17A2O00624 439 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 SSX4O60224 188 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 RP2O75695 350 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 ACAA1P09110 424 aaPredicted RBP20.43■□□□□ 0.86
HMGA2-201ENST00000354636 LYNX1P0DP58 116 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 CFPP27918 469 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 CAV3P56539 151 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 SPCS2Q15005 226 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 CARTPTQ16568 116 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 HFEQ30201 348 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 MKXQ8IYA7 352 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 SAXO1Q8IYX7 474 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 PXT1Q8NFP0 134 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 OR11L1Q8NGX0 322 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 OR10Z1Q8NGY1 313 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 OR51F2Q8NH61 342 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 DCSTAMPQ9H295 470 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 BARX1Q9HBU1 254 aaPredicted RBP20.43■□□□□ 0.86
HMGA2-201ENST00000354636 DCAF16Q9NXF7 216 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 MTCH1Q9NZJ7 389 aa20.43■□□□□ 0.86
HMGA2-201ENST00000354636 IGKV1-12A0A0C4DH73 117 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 A6NHS1 94 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 IFITM5A6NNB3 132 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 ANGPTL7O43827 346 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 LHBP01229 141 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 IGKV1D-12P01611 117 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 TMEM225BP0DP42 221 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 ASCL4Q6XD76 172 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 OR6M1Q8NGM8 313 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 HPS1Q92902 700 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 FAM192AQ9GZU8 254 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 PLGRKTQ9HBL7 147 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 RNF7Q9UBF6 113 aa20.42■□□□□ 0.86
HMGA2-201ENST00000354636 ANKRD17O75179 2603 aaKnown RBP20.41■□□□□ 0.86
HMGA2-201ENST00000354636 ITPR2Q14571 2701 aa20.41■□□□□ 0.86
HMGA2-201ENST00000354636 ARID1AO14497 2285 aa20.41■□□□□ 0.86
HMGA2-201ENST00000354636 NOS1APO75052 506 aaPredicted RBP20.41■□□□□ 0.86
HMGA2-201ENST00000354636 CYB5AP00167 134 aa20.41■□□□□ 0.86
HMGA2-201ENST00000354636 PGA5P0DJD9 388 aa20.41■□□□□ 0.86
HMGA2-201ENST00000354636 HTR2CP28335 458 aa20.41■□□□□ 0.86
HMGA2-201ENST00000354636 FOXB2Q5VYV0 432 aa20.41■□□□□ 0.86
HMGA2-201ENST00000354636 GCSAMQ8N6F7 178 aa20.41■□□□□ 0.86
HMGA2-201ENST00000354636 LRRC29Q8WV35 223 aa20.41■□□□□ 0.86
HMGA2-201ENST00000354636 SLC25A28Q96A46 364 aa20.41■□□□□ 0.86
HMGA2-201ENST00000354636 BATF3Q9NR55 127 aa20.41■□□□□ 0.86
HMGA2-201ENST00000354636 MRPS28Q9Y2Q9 187 aaKnown RBP20.41■□□□□ 0.86
HMGA2-201ENST00000354636 NAV2Q8IVL1 2488 aa20.41■□□□□ 0.86
HMGA2-201ENST00000354636 LRRC30A6NM36 301 aa20.4■□□□□ 0.86
HMGA2-201ENST00000354636 SRRM5B3KS81 715 aa20.4■□□□□ 0.86
HMGA2-201ENST00000354636 TMEM178BH3BS89 294 aa20.4■□□□□ 0.86
HMGA2-201ENST00000354636 AIPO00170 330 aa20.4■□□□□ 0.86
HMGA2-201ENST00000354636 AKR7A2O43488 359 aa20.4■□□□□ 0.86
HMGA2-201ENST00000354636 CYB5R3P00387 301 aaPredicted RBP20.4■□□□□ 0.86
HMGA2-201ENST00000354636 IRF2P14316 349 aa20.4■□□□□ 0.86
HMGA2-201ENST00000354636 SFXN4Q6P4A7 337 aa20.4■□□□□ 0.86
HMGA2-201ENST00000354636 LRRC75A-AS1Q8N1F1 130 aa20.4■□□□□ 0.86
HMGA2-201ENST00000354636 POC1AQ8NBT0 407 aa20.4■□□□□ 0.86
HMGA2-201ENST00000354636 SLAMF9Q96A28 289 aa20.4■□□□□ 0.86
HMGA2-201ENST00000354636 SLC25A46Q96AG3 418 aa20.4■□□□□ 0.86
HMGA2-201ENST00000354636 DGCR14Q96DF8 476 aaKnown RBP20.4■□□□□ 0.86
HMGA2-201ENST00000354636 SMURF1Q9HCE7 757 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms