RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 GPR3P46089 330 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 HAAOP46952 286 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 NKAIN2Q5VXU1 208 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 OR5R1Q8NH85 324 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 LKAAEAR1Q8TD35 194 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 UBE2FQ969M7 185 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 ANAPC13Q9BS18 74 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 ALOX12BO75342 701 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 SP6Q3SY56 376 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 TMEM81Q6P7N7 255 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 JKAMPQ9P055 326 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 TRGV10A0A0A0MS01 117 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 HMX2A2RU54 273 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 RBFOX3A6NFN3 312 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 SERINC4A6NH21 518 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 HIST1H1TP22492 207 aaPredicted RBP7.25□□□□□ -1.25
SCN8A-201ENST00000354534 PTGFRP43088 359 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 SLC37A1P57057 533 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 FUT7Q11130 342 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 SHBQ15464 509 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 RBM45Q8IUH3 476 aaKnown RBP7.25□□□□□ -1.25
SCN8A-201ENST00000354534 NUDCD2Q8WVJ2 157 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 FLRT3Q9NZU0 649 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 LPAR3Q9UBY5 353 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 MT-ATP6P00846 226 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 CA1P00915 261 aaPredicted RBP7.25□□□□□ -1.25
SCN8A-201ENST00000354534 TBXA2RP21731 343 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 DYNLT3P51808 116 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 OR5A1Q8NGJ0 315 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 LRRC15Q8TF66 581 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 IGKV3D-15A0A087WSY6 115 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 IGKV6D-41A0A0C4DH26 115 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 IGKV3-15P01624 115 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 IGHEP01854 428 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 GABRA1P14867 456 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 SLC38A11Q08AI6 406 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 MED25Q71SY5 747 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 OR2W3Q7Z3T1 314 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 OSTM1Q86WC4 334 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 OR10V1Q8NGI7 309 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 IGSF8Q969P0 613 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 C12orf42Q96LP6 360 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 APOOQ9BUR5 198 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 DUSP23Q9BVJ7 150 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 CHRNA10Q9GZZ6 450 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 MRPL16Q9NX20 251 aaKnown RBP7.25□□□□□ -1.25
SCN8A-201ENST00000354534 PCOLCE2Q9UKZ9 415 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 ANKRD31Q8N7Z5 1873 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 IGKV3D-11A0A0A0MRZ8 115 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 H3BNC9 293 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 ARNTLO00327 626 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 IGKV3-11P04433 115 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 CD14P08571 375 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 GPNMBQ14956 572 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 PRSS36Q5K4E3 855 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 MRM1Q6IN84 353 aaKnown RBP7.25□□□□□ -1.25
SCN8A-201ENST00000354534 SIRT7Q9NRC8 400 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 ST3GAL6Q9Y274 331 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 LAMA4Q16363 1823 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 SLC17A2O00624 439 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 CD74P04233 296 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 SMIM13P0DJ93 91 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 ZDHHC23Q8IYP9 409 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 OR10G4Q8NGN3 311 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 OR10G9Q8NGN4 311 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 OR10G7Q8NGN6 311 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 PCYT2Q99447 389 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 NIPSNAP1Q9BPW8 284 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 EIF4E2O60573 245 aaKnown RBP7.25□□□□□ -1.25
SCN8A-201ENST00000354534 COL9A3Q14050 684 aaPredicted RBP7.25□□□□□ -1.25
SCN8A-201ENST00000354534 ELFN2Q5R3F8 820 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 RPS4Y2Q8TD47 263 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 DOCK10Q96BY6 2186 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 SLAMF8Q9P0V8 285 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 ZDBF2Q9HCK1 2354 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 POLR2IP36954 125 aaKnown RBP7.25□□□□□ -1.25
SCN8A-201ENST00000354534 HSF5Q4G112 596 aaPredicted RBP7.25□□□□□ -1.25
SCN8A-201ENST00000354534 PRSS50Q9UI38 385 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 NOTCH3Q9UM47 2321 aa7.25□□□□□ -1.25
SCN8A-201ENST00000354534 C1QTNF9BB2RNN3 333 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 LTB4R2Q9NPC1 389 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 HINT3Q9NQE9 182 aaKnown RBP7.24□□□□□ -1.25
SCN8A-201ENST00000354534 IL19Q9UHD0 177 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 CORINQ9Y5Q5 1042 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 FGF2P09038 288 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 RRADP55042 308 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 HLA-DRB3P79483 266 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 VMA21Q3ZAQ7 101 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 TMEM179BQ7Z7N9 219 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 FBXO17Q96EF6 278 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 ZMIZ1Q9ULJ6 1067 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 GVINP1Q7Z2Y8 2422 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 ZNF541Q9H0D2 1346 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 CSF2RAP15509 400 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 CEACAM6P40199 344 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 ZC3H3Q8IXZ2 948 aaKnown RBP7.24□□□□□ -1.25
SCN8A-201ENST00000354534 CACNA1DQ01668 2161 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 A0A096LPE4 126 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 A0A1W2PPZ6 126 aa7.24□□□□□ -1.25
SCN8A-201ENST00000354534 HPXP02790 462 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms