RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 ADAM30Q9UKF2 790 aa17.06■□□□□ 0.32
SIGMAR1-202ENST00000353468 TMEM14DPA8MWL7 114 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 CDIPTO14735 213 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 SYNGR1O43759 233 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 PTBP3O95758 552 aaKnown RBP17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 CYB5AP00167 134 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 SRP9P49458 86 aaKnown RBP17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 SNRPD2P62316 118 aaKnown RBP17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 IL24Q13007 206 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 RSU1Q15404 277 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 UBE2NLQ5JXB2 153 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 AGAP6Q5VW22 663 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 PRAMEF6Q5VXH4 476 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 OR2W3Q7Z3T1 314 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 TMEM200AQ86VY9 491 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 C11orf53Q8IXP5 236 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 ZCCHC24Q8N2G6 241 aaKnown RBP17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 OR10K1Q8NGX5 313 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 KCNG3Q8TAE7 436 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 ITLN1Q8WWA0 313 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 WDFY2Q96P53 400 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 CBLN4Q9NTU7 201 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 FBLN5Q9UBX5 448 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 RAB22AQ9UL26 194 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 PKDREJQ9NTG1 2253 aa17.05■□□□□ 0.32
SIGMAR1-202ENST00000353468 FAM25AB3EWG3 89 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 FAM25CB3EWG5 89 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 FAM25GB3EWG6 89 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 ZNF780AO75290 641 aaPredicted RBP17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 CTAG2O75638 210 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 APOA1P02647 267 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 EIF4EP06730 217 aaKnown RBP17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 ELK1P19419 428 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 SERPINA2P20848 420 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 EFNB2P52799 333 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 ART1P52961 327 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 UNC119Q13432 240 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 GPR176Q14439 515 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 MPPED2Q15777 294 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 SPRNQ5BIV9 151 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 LRRC28Q86X40 367 aaPredicted RBP17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 PTX4Q96A99 478 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 SLC25A38Q96DW6 304 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 CST11Q9H112 138 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 TLNRD1Q9H1K6 362 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 UFSP2Q9NUQ7 469 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 RHBDL2Q9NX52 303 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 MTCH1Q9NZJ7 389 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 POLDIP2Q9Y2S7 368 aa17.04■□□□□ 0.32
SIGMAR1-202ENST00000353468 A0A1W2PP11 408 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 A6NLC8 198 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 RHBDL1O75783 438 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 HTR3BO95264 441 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 CSTBP04080 98 aaKnown RBP17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 CD55P08174 381 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 DANCRP0C864 163 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 RAB6AP20340 208 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 FAM209AQ5JX71 171 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 CMTM4Q8IZR5 234 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 TMEM104Q8NE00 496 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 FAM46BQ96A09 425 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 SLAMF9Q96A28 289 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 DIRAS2Q96HU8 199 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 ABCG5Q9H222 651 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 BANF2Q9H503 90 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 UBTD1Q9HAC8 227 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 IL36GQ9NZH8 169 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 COL12A1Q99715 3063 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 SPTAN1Q13813 2472 aaKnown RBP17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 ARFGEF3Q5TH69 2177 aa17.03■□□□□ 0.32
SIGMAR1-202ENST00000353468 TRAPPC2LH3BP13 241 aa17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 CRTAPO75718 401 aaPredicted RBP17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 MPIG6BO95866 241 aa17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 CD8AP01732 235 aa17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 SFTPBP07988 381 aa17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 SOD3P08294 240 aa17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 NPBWR2P48146 333 aa17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 TLE4Q04727 773 aa17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 DTX2Q86UW9 622 aa17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 RAB40AQ8WXH6 277 aa17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 PCDHB16Q9NRJ7 776 aa17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 FBXO9Q9UK97 447 aaPredicted RBP17.02■□□□□ 0.32
SIGMAR1-202ENST00000353468 CDC14BO60729 498 aa17.02■□□□□ 0.31
SIGMAR1-202ENST00000353468 KDM4BO94953 1096 aa17.02■□□□□ 0.31
SIGMAR1-202ENST00000353468 BCL3P20749 454 aa17.02■□□□□ 0.31
SIGMAR1-202ENST00000353468 GATA4P43694 442 aa17.02■□□□□ 0.31
SIGMAR1-202ENST00000353468 CCL8P80075 99 aa17.02■□□□□ 0.31
SIGMAR1-202ENST00000353468 C11orf71Q6IPW1 123 aa17.02■□□□□ 0.31
SIGMAR1-202ENST00000353468 ZNF826PQ6ZT77 177 aa17.02■□□□□ 0.31
SIGMAR1-202ENST00000353468 CCDC190Q86UF4 302 aa17.02■□□□□ 0.31
SIGMAR1-202ENST00000353468 CDH24Q86UP0 819 aa17.02■□□□□ 0.31
SIGMAR1-202ENST00000353468 TMEM59Q9BXS4 323 aa17.02■□□□□ 0.31
SIGMAR1-202ENST00000353468 DECR2Q9NUI1 292 aa17.02■□□□□ 0.31
SIGMAR1-202ENST00000353468 CHD3Q12873 2000 aaKnown RBP17.01■□□□□ 0.31
SIGMAR1-202ENST00000353468 TPD52L2O43399 206 aaKnown RBP17.01■□□□□ 0.31
SIGMAR1-202ENST00000353468 ACAA1P09110 424 aaPredicted RBP17.01■□□□□ 0.31
SIGMAR1-202ENST00000353468 BMP4P12644 408 aa17.01■□□□□ 0.31
SIGMAR1-202ENST00000353468 GTF2F2P13984 249 aa17.01■□□□□ 0.31
SIGMAR1-202ENST00000353468 MGMTP16455 207 aa17.01■□□□□ 0.31
SIGMAR1-202ENST00000353468 PPOXP50336 477 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms