RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CD80P33681 288 aa21.42■■□□□ 1.02
CPNE1-202ENST00000352393 TMEM123Q8N131 208 aa21.42■■□□□ 1.02
CPNE1-202ENST00000352393 ZNF799Q96GE5 643 aa21.42■■□□□ 1.02
CPNE1-202ENST00000352393 ZNF385AQ96PM9 386 aaKnown RBP21.42■■□□□ 1.02
CPNE1-202ENST00000352393 SPEGQ15772 3267 aa21.42■■□□□ 1.02
CPNE1-202ENST00000352393 MTRF1O75570 445 aaKnown RBP21.41■■□□□ 1.02
CPNE1-202ENST00000352393 DVL1P1P54792 670 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-202ENST00000352393 TMEM33P57088 247 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 RNF122Q9H9V4 155 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 PADI1Q9ULC6 663 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 EDARQ9UNE0 448 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 AGPAT2O15120 278 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 IFNA21P01568 189 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 DBHP09172 617 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 PAX6P26367 422 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 ID4P47928 161 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 FAM3AP98173 230 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 DHRS11Q6UWP2 260 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 LRRC18Q8N456 261 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 KIRREL1Q96J84 757 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 CMSS1Q9BQ75 279 aaKnown RBP21.41■■□□□ 1.02
CPNE1-202ENST00000352393 SULT4A1Q9BR01 284 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 LIME1Q9H400 295 aa21.41■■□□□ 1.02
CPNE1-202ENST00000352393 A0A087WZY1 265 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 COLCA2A8K830 154 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 DHHO43323 396 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 OR8U9P0C7N5 309 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 PEA15Q15121 130 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 PLXDC2Q6UX71 529 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 UBAC2Q8NBM4 344 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 OR8U1Q8NH10 309 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 C12orf57Q99622 126 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 ARV1Q9H2C2 271 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 LSM5Q9Y4Y9 91 aaKnown RBP21.4■■□□□ 1.02
CPNE1-202ENST00000352393 KIAA1549Q9HCM3 1950 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 TP53I11O14683 189 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 APOC1P02654 83 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 OR5H8P0DN80 308 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 SNAI3Q3KNW1 292 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 PLEKHA2Q9HB19 425 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 GPR173Q9NS66 373 aa21.4■■□□□ 1.02
CPNE1-202ENST00000352393 TMEM225BP0DP42 221 aa21.39■■□□□ 1.01
CPNE1-202ENST00000352393 FOLR2P14207 255 aa21.39■■□□□ 1.01
CPNE1-202ENST00000352393 RSPO4Q2I0M5 234 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-202ENST00000352393 SMIM3Q9BZL3 60 aa21.39■■□□□ 1.01
CPNE1-202ENST00000352393 MYO15AQ9UKN7 3530 aa21.39■■□□□ 1.01
CPNE1-202ENST00000352393 IGHV3-15A0A0B4J1V0 119 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 A0A1W2PQM1 296 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 FAM76BQ5HYJ3 339 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 GUSBP11Q6P575 273 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 ERGIC1Q969X5 290 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 CACFD1Q9UGQ2 172 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 AK3Q9UIJ7 227 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 FOXD3Q9UJU5 478 aaPredicted RBP21.38■■□□□ 1.01
CPNE1-202ENST00000352393 HSF4Q9ULV5 492 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 KCNJ3P48549 501 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 OR9K2Q8NGE7 335 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 SPTSSAQ969W0 71 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 SPSB1Q96BD6 273 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 SGK3Q96BR1 496 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 SMCO4Q9NRQ5 59 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 PLEK2Q9NYT0 353 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 TIMM10BQ9Y5J6 103 aa21.38■■□□□ 1.01
CPNE1-202ENST00000352393 IGHV5-10-1A0A0J9YXX1 117 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 NPIPA2E9PIF3 369 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 NPIPA3F8WFD2 350 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 VAMP5O95183 116 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 PNLIPP16233 465 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 DTYMKP23919 212 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 ACKR3P25106 362 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 MTCP1P56278 107 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 PIGPP57054 158 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 TDHQ8IZJ6 230 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 C2CD4CQ8TF44 421 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 FBXO17Q96EF6 278 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 UCN2Q96RP3 112 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 FAAP24Q9BTP7 215 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 RBM24Q9BX46 236 aaKnown RBP21.37■■□□□ 1.01
CPNE1-202ENST00000352393 METTL9Q9H1A3 318 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 KPTNQ9Y664 436 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 RTTNQ86VV8 2226 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 EIF1BO60739 113 aaKnown RBP21.37■■□□□ 1.01
CPNE1-202ENST00000352393 IFNA4P05014 189 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 CRYGSP22914 178 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 SUCLG1P53597 346 aaKnown RBP21.37■■□□□ 1.01
CPNE1-202ENST00000352393 TMEM187Q14656 261 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 PCOLCEQ15113 449 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 SWI5Q1ZZU3 235 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 MRPL14Q6P1L8 145 aaKnown RBP21.37■■□□□ 1.01
CPNE1-202ENST00000352393 GALNT14Q96FL9 552 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 PHF7Q9BWX1 381 aaPredicted RBP21.37■■□□□ 1.01
CPNE1-202ENST00000352393 NAA60Q9H7X0 242 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 NECAP2Q9NVZ3 263 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 ZNF581Q9P0T4 197 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 STARD10Q9Y365 291 aa21.37■■□□□ 1.01
CPNE1-202ENST00000352393 SDK1Q7Z5N4 2213 aa21.36■■□□□ 1.01
CPNE1-202ENST00000352393 SCGB1D2O95969 90 aa21.36■■□□□ 1.01
CPNE1-202ENST00000352393 MBPP02686 304 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-202ENST00000352393 CYC1P08574 325 aa21.36■■□□□ 1.01
CPNE1-202ENST00000352393 ZFP82Q8N141 532 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms