RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 WWTR1Q9GZV5 400 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 TAS2R4Q9NYW5 299 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 AK3Q9UIJ7 227 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 AQP7P3A6NL99 342 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 ACAA2P42765 397 aaKnown RBP9.39□□□□□ -0.91
CAPN3-203ENST00000349748 HIST1H3AP68431 136 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 ALG10BQ5I7T1 473 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 WDR38Q5JTN6 314 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 MRPL2Q5T653 305 aaKnown RBP9.39□□□□□ -0.91
CAPN3-203ENST00000349748 LINC01590Q5TEZ4 76 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 MFSD12Q6NUT3 480 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 CALHM1Q8IU99 346 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 MFSD9Q8NBP5 474 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 RCBTB1Q8NDN9 531 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 VN1R17PQ8TDU5 208 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 TMEM170AQ8WVE7 144 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 SPACA7Q96KW9 195 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 VAMP8Q9BV40 100 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 MS4A8Q9BY19 250 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 MDC1Q14676 2089 aaKnown RBP9.39□□□□□ -0.91
CAPN3-203ENST00000349748 B4DEV8 164 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 TOMM40O96008 361 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 HSPB1P04792 205 aaKnown RBP9.39□□□□□ -0.91
CAPN3-203ENST00000349748 CA3P07451 260 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 CDKN1AP38936 164 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 TMEM183BQ1AE95 376 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 TMEM241Q24JQ0 296 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 OR2G3Q8NGZ4 309 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 ADAMTS15Q8TE58 950 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 SLC22A12Q96S37 553 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 MTIF3Q9H2K0 278 aaKnown RBP9.39□□□□□ -0.91
CAPN3-203ENST00000349748 CST9LQ9H4G1 147 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 FBRSQ9HAH7 460 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 P4HTMQ9NXG6 502 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 KIAA1456Q9P272 454 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 A0A1W2PR48 441 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 GPR137BO60478 399 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 HMGA1P17096 107 aaKnown RBP9.39□□□□□ -0.91
CAPN3-203ENST00000349748 MLC1Q15049 377 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 TPTE2P1Q5T6R2 138 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 PHF19Q5T6S3 580 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 PLPP4Q5VZY2 271 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 PTCRAQ6ISU1 281 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-203ENST00000349748 TPRG1Q6ZUI0 275 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 SAXO1Q8IYX7 474 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 OR56B2PQ8NGI1 322 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 DYRK2Q92630 601 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 ZNF703Q9H7S9 590 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-203ENST00000349748 CLEC4EQ9ULY5 219 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 COX11Q9Y6N1 276 aa9.39□□□□□ -0.91
CAPN3-203ENST00000349748 COL4A3Q01955 1670 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 IGHV2-70DA0A0C4DH43 119 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 TMEM212A6NML5 194 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 SDCBPO00560 298 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-203ENST00000349748 SOD2P04179 222 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 CTSAP10619 480 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 REEP5Q00765 189 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 PSG6Q00889 435 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 IL24Q13007 206 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 FAM90A2PQ658T7 463 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 FCRL6Q6DN72 434 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 TMEM225Q6GV28 225 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 DPPA3Q6W0C5 159 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 TEX43Q6ZNM6 134 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 NKAIN3Q8N8D7 197 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 OR56A1Q8NGH5 318 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 PLD4Q96BZ4 506 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 LOXL4Q96JB6 756 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 AMELYQ99218 206 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 TMEM242Q9NWH2 141 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 HIF3AQ9Y2N7 669 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 INSL5Q9Y5Q6 135 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 YPEL1O60688 119 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 DNAJB6O75190 326 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 PIAS2O75928 621 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 SPINT3P49223 89 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 ZNF41P51814 821 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-203ENST00000349748 ZNF506Q5JVG8 444 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 PRAMEF20Q5VT98 475 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 Q6ZWC4 215 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 DPY19L4Q7Z388 723 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 ZNF709Q8N972 641 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 ZNF738Q8NE65 137 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 OR4D6Q8NGJ1 314 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 CLDND2Q8NHS1 167 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 MRPL24Q96A35 216 aaKnown RBP9.38□□□□□ -0.91
CAPN3-203ENST00000349748 ZNF845Q96IR2 970 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-203ENST00000349748 YPEL2Q96QA6 119 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 KLF16Q9BXK1 252 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-203ENST00000349748 SRA1Q9HD15 236 aaKnown RBP9.38□□□□□ -0.91
CAPN3-203ENST00000349748 FBXO34Q9NWN3 711 aa9.38□□□□□ -0.91
CAPN3-203ENST00000349748 PRUNE2Q8WUY3 3088 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 ANAPC1Q9H1A4 1944 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 H7C1C5 153 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 PFN1P07737 140 aaKnown RBP9.37□□□□□ -0.91
CAPN3-203ENST00000349748 ALOX5APP20292 161 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 SSR2P43308 183 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 HINT1P49773 126 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-203ENST00000349748 UBE2G2P60604 165 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 LCN6P62502 163 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms