RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 A0A1B0GUH1 482 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 KLRC4-KLRK1H3BQV0 150 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 GALP22466 123 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 GABRA2P47869 451 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 NPBWR2P48146 333 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 UNQ9370/PRO34162Q6UXP9 181 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 WDR5BQ86VZ2 330 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 PDZD9Q8IXQ8 264 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 MKXQ8IYA7 352 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 WDR13Q9H1Z4 485 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 DENND4AQ7Z401 1863 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 ANKRD30BLA7E2S9 258 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 YKT6O15498 198 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 DHRS3O75911 302 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 HIST1H1DP16402 221 aaKnown RBP11.64□□□□□ -0.55
CASC4-202ENST00000345795 CXCL2P19875 107 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 AKR1C3P42330 323 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 OR2M7Q8NG81 312 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 SGK3Q96BR1 496 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 TTTY12Q9BZ98 90 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 ITGB1BP2Q9UKP3 347 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 LIPGQ9Y5X9 500 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 MEIKINA0A087WXM9 373 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 SSX5O60225 188 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 PPA1Q15181 289 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 ZNF766Q5HY98 468 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 PXDC1Q5TGL8 231 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 FAM109AQ8N4B1 249 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 IMMP1LQ96LU5 166 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 MRI1Q9BV20 369 aa11.64□□□□□ -0.55
CASC4-202ENST00000345795 SOX15O60248 233 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 SRD5A2P31213 254 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 CAMK2BQ13554 666 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 MEF2DQ14814 521 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 ZBTB37Q5TC79 503 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 LAMTOR1Q6IAA8 161 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 OR11L1Q8NGX0 322 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 PSMF1Q92530 271 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 FER1L6-AS2Q96M78 137 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 NUP50Q9UKX7 468 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 LOC102725191A0A1B0GVB3 256 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 SLC22A20A6NK97 555 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 PTGDSP41222 190 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 ECH1Q13011 328 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 CNN3Q15417 329 aaKnown RBP11.63□□□□□ -0.55
CASC4-202ENST00000345795 ASPHD2Q6ICH7 369 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 ZFHX4Q86UP3 3567 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 TRBV5-7A0A0A0MS05 114 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 TRGV5A0A0B4J1U4 118 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 DEFB108AA8MXU0 73 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 NXPH2O95156 264 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 MPC2O95563 127 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 PTBP1P26599 531 aaKnown RBP eCLIP11.63□□□□□ -0.556e-7■■■■■ 27.6
CASC4-202ENST00000345795 PIGPP57054 158 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 ROM1Q03395 351 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 IZUMO4Q1ZYL8 232 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 TMEM88Q6PEY1 159 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 GSX2Q9BZM3 304 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 C12orf10Q9HB07 376 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 MSL2Q9HCI7 577 aa11.63□□□□□ -0.55
CASC4-202ENST00000345795 APOC1P02654 83 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 ERVS71-1P61550 626 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 VAMP2P63027 116 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 TOR2AQ5JU69 321 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 EMG1Q92979 244 aaKnown RBP11.62□□□□□ -0.55
CASC4-202ENST00000345795 C20orf24Q9BUV8 137 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 EMC3Q9P0I2 261 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 TRAPPC2LQ9UL33 140 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 PPP1R3CQ9UQK1 317 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 A0A1B0GW55 424 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 DUX4L2P0CJ85 424 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 DUX4L3P0CJ86 424 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 DUX4L4P0CJ87 422 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 DUX4L5P0CJ88 424 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 DUX4L6P0CJ89 424 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 DUX4L7P0CJ90 424 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 CEBPDP49716 269 aaPredicted RBP11.62□□□□□ -0.55
CASC4-202ENST00000345795 PLAC9Q5JTB6 97 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 NUFIP2Q7Z417 695 aaKnown RBP11.62□□□□□ -0.55
CASC4-202ENST00000345795 CDH26Q8IXH8 852 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 OR13C8Q8NGS7 320 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 LPAR5Q9H1C0 372 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 DUX4Q9UBX2 424 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 STARD10Q9Y365 291 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 ARFGEF3Q5TH69 2177 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 SULT1A3P0DMM9 295 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 SULT1A4P0DMN0 295 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 NTF4P34130 210 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 FOXC1Q12948 553 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 TERB2Q8NHR7 220 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 FAM173AQ9BQD7 235 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 OPN4Q9UHM6 478 aa11.62□□□□□ -0.55
CASC4-202ENST00000345795 DMXL2Q8TDJ6 3036 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 IGKV1-9A0A0C4DH69 117 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 TUSC2O75896 110 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 PMS2P2O95744 297 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 ZNF806P0C7X5 589 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 ZNF728P0DKX0 622 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 BMP5P22003 454 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 ZNF626Q68DY1 528 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms